RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 F9P00740 461 aa13□□□□□ -0.33
CLCN6-206ENST00000376496 TIMP1P01033 207 aa13□□□□□ -0.33
CLCN6-206ENST00000376496 IGLV3-25P01717 112 aa13□□□□□ -0.33
CLCN6-206ENST00000376496 APRTP07741 180 aa13□□□□□ -0.33
CLCN6-206ENST00000376496 SSTR1P30872 391 aa13□□□□□ -0.33
CLCN6-206ENST00000376496 ACTN2P35609 894 aa13□□□□□ -0.33
CLCN6-206ENST00000376496 C1QTNF8P60827 252 aa13□□□□□ -0.33
CLCN6-206ENST00000376496 WDR5P61964 334 aaKnown RBP13□□□□□ -0.33
CLCN6-206ENST00000376496 BTG3Q14201 252 aaPredicted RBP13□□□□□ -0.33
CLCN6-206ENST00000376496 HEATR6Q6AI08 1181 aaKnown RBP13□□□□□ -0.33
CLCN6-206ENST00000376496 ANKS3Q6ZW76 656 aa13□□□□□ -0.33
CLCN6-206ENST00000376496 C14orf80Q86SX3 495 aa13□□□□□ -0.33
CLCN6-206ENST00000376496 CDKL3Q8IVW4 592 aaPredicted RBP13□□□□□ -0.33
CLCN6-206ENST00000376496 TFB1MQ8WVM0 346 aaKnown RBP13□□□□□ -0.33
CLCN6-206ENST00000376496 FAM129AQ9BZQ8 928 aa13□□□□□ -0.33
CLCN6-206ENST00000376496 VPS37BQ9H9H4 285 aa13□□□□□ -0.33
CLCN6-206ENST00000376496 SCML2Q9UQR0 700 aa13□□□□□ -0.33
CLCN6-206ENST00000376496 SHROOM3Q8TF72 1996 aa13□□□□□ -0.33
CLCN6-206ENST00000376496 RASGRF2O14827 1237 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 SEC24AO95486 1093 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 ZFXP17010 805 aaPredicted RBP12.99□□□□□ -0.33
CLCN6-206ENST00000376496 NR1D1P20393 614 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 YWHAQP27348 245 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 GUCY1A3Q02108 690 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 SCAPQ12770 1279 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 VSIG1Q86XK7 387 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 AGGF1Q8N302 714 aaeCLIP12.99□□□□□ -0.33
CLCN6-206ENST00000376496 HTR3CQ8WXA8 447 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 P2RY11Q96G91 374 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 SMOC2Q9H3U7 446 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 CCSER2Q9H7U1 834 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 NDFIP2Q9NV92 336 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 MPP6Q9NZW5 540 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 CHMP2BQ9UQN3 213 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 ZBBXA8MT70 800 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 ZNF487B1APH4 448 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 HAPLN1P10915 354 aaPredicted RBP12.99□□□□□ -0.33
CLCN6-206ENST00000376496 IRAK1P51617 712 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 OLIG2Q13516 323 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 AUHQ13825 339 aaKnown RBP12.99□□□□□ -0.33
CLCN6-206ENST00000376496 KCNJ11Q14654 390 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 EFTUD2Q15029 972 aaKnown RBP eCLIP12.99□□□□□ -0.332e-6■■■■□ 24.5
CLCN6-206ENST00000376496 USP41Q3LFD5 358 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 ARHGAP36Q6ZRI8 547 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 MON1AQ86VX9 555 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 PSTKQ8IV42 348 aaKnown RBP12.99□□□□□ -0.33
CLCN6-206ENST00000376496 SCML4Q8N228 414 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 CLSTN3Q9BQT9 956 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 ERICH4A6NGS2 130 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 RNF103O00237 685 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 CAPN15O75808 1086 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 PARNO95453 639 aaKnown RBP12.99□□□□□ -0.33
CLCN6-206ENST00000376496 SPATA31D3P0C874 917 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 CREB1P16220 341 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 CA8P35219 290 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 NR2C2P49116 596 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 EIF3BP55884 814 aaKnown RBP12.99□□□□□ -0.33
CLCN6-206ENST00000376496 ELAVL2Q12926 359 aaKnown RBP12.99□□□□□ -0.33
CLCN6-206ENST00000376496 EIF4EBP2Q13542 120 aaPredicted RBP12.99□□□□□ -0.33
CLCN6-206ENST00000376496 SPDYCQ5MJ68 293 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 SPATA31D4Q6ZUB0 917 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 CENPUQ71F23 418 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 CYP4X1Q8N118 509 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 MDM1Q8TC05 714 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 FCRL2Q96LA5 508 aaPredicted RBP12.99□□□□□ -0.33
CLCN6-206ENST00000376496 RRN3Q9NYV6 651 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 PAK5Q9P286 719 aa12.99□□□□□ -0.33
CLCN6-206ENST00000376496 RCOR3Q9P2K3 495 aaPredicted RBP12.99□□□□□ -0.33
CLCN6-206ENST00000376496 CLUHO75153 1309 aa12.98□□□□□ -0.33
CLCN6-206ENST00000376496 HMGB1P1B2RPK0 211 aaPredicted RBP12.98□□□□□ -0.33
CLCN6-206ENST00000376496 H7C4K7 107 aa12.98□□□□□ -0.33
CLCN6-206ENST00000376496 RGS16O15492 202 aaPredicted RBP12.98□□□□□ -0.33
CLCN6-206ENST00000376496 MAGEA11P43364 429 aa12.98□□□□□ -0.33
CLCN6-206ENST00000376496 GPX6P59796 221 aa12.98□□□□□ -0.33
CLCN6-206ENST00000376496 C10orf120Q5SQS8 335 aa12.98□□□□□ -0.33
CLCN6-206ENST00000376496 C16orf59Q7L2K0 433 aa12.98□□□□□ -0.33
CLCN6-206ENST00000376496 NECAB2Q7Z6G3 386 aa12.98□□□□□ -0.33
CLCN6-206ENST00000376496 FBXO36Q8NEA4 188 aa12.98□□□□□ -0.33
CLCN6-206ENST00000376496 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.98□□□□□ -0.33
CLCN6-206ENST00000376496 POC1B-GALNT4F8VUJ3 575 aa12.98□□□□□ -0.33
CLCN6-206ENST00000376496 EN2P19622 333 aaPredicted RBP12.98□□□□□ -0.33
CLCN6-206ENST00000376496 CCR1P32246 355 aa12.98□□□□□ -0.33
CLCN6-206ENST00000376496 PAFAH1B3Q15102 231 aaKnown RBP12.98□□□□□ -0.33
CLCN6-206ENST00000376496 SMAD1Q15797 465 aaKnown RBP12.98□□□□□ -0.33
CLCN6-206ENST00000376496 ANKRD20A2Q5SQ80 823 aa12.98□□□□□ -0.33
CLCN6-206ENST00000376496 ANKRD20A1Q5TYW2 823 aa12.98□□□□□ -0.33
CLCN6-206ENST00000376496 ANKRD20A3Q5VUR7 823 aa12.98□□□□□ -0.33
CLCN6-206ENST00000376496 ARHGEF18Q6ZSZ5 1173 aa12.98□□□□□ -0.33
CLCN6-206ENST00000376496 PCGF5Q86SE9 256 aa12.98□□□□□ -0.33
CLCN6-206ENST00000376496 SPPL2BQ8TCT7 592 aa12.98□□□□□ -0.33
CLCN6-206ENST00000376496 EXOC4Q96A65 974 aa12.98□□□□□ -0.33
CLCN6-206ENST00000376496 ZNF689Q96CS4 500 aaPredicted RBP12.98□□□□□ -0.33
CLCN6-206ENST00000376496 RTP4Q96DX8 246 aa12.98□□□□□ -0.33
CLCN6-206ENST00000376496 EPAS1Q99814 870 aa12.98□□□□□ -0.33
CLCN6-206ENST00000376496 FBXO44Q9H4M3 255 aa12.98□□□□□ -0.33
CLCN6-206ENST00000376496 ARHGEF38Q9NXL2 777 aa12.98□□□□□ -0.33
CLCN6-206ENST00000376496 MTRRQ9UBK8 725 aa12.98□□□□□ -0.33
CLCN6-206ENST00000376496 NEU3Q9UQ49 428 aa12.98□□□□□ -0.33
CLCN6-206ENST00000376496 SLC38A8A6NNN8 435 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 CAPN2P17655 700 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms