RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ADORA2AP29274 412 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 VGLL4Q14135 290 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 FSCBQ5H9T9 825 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 PCDH20Q8N6Y1 951 aaKnown RBP14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 REPS2Q8NFH8 660 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 APBA2Q99767 749 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 COPS7BQ9H9Q2 264 aaPredicted RBP14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 VCX3AQ9NNX9 186 aa14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 MAP3K20Q9NYL2 800 aaKnown RBP14.79□□□□□ -0.04
TNFRSF1B-201ENST00000376259 KIF19Q2TAC6 998 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 DPY19L2Q6NUT2 758 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 CAPN8A6NHC0 703 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 IL18RAPO95256 599 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 AMHP03971 560 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 LINGO3P0C6S8 592 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 SATB1Q01826 763 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 TRMT5Q32P41 509 aaKnown RBP14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 ACAD11Q709F0 780 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 CCDC185Q8N715 623 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 SNRNP27Q8WVK2 155 aaKnown RBP14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 EME1Q96AY2 570 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 TBCBQ99426 244 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 EBNA1BP2Q99848 306 aaKnown RBP14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 SYBUQ9NX95 663 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 DTNAQ9Y4J8 743 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 SNX10Q9Y5X0 201 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 PSAT1Q9Y617 370 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 ATP8B3O60423 1300 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 ADCYAP1R1P41586 468 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 SERPINB9P50453 376 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 CCDC15Q0P6D6 951 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 LRRC23Q53EV4 343 aaPredicted RBP14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 IRGCQ6NXR0 463 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 C15orf39Q6ZRI6 1047 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 PDZD4Q76G19 769 aaPredicted RBP14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 SCN4BQ8IWT1 228 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 CHST13Q8NET6 341 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 CMTM5Q96DZ9 223 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 PHF21BQ96EK2 531 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 FSD1LQ9BXM9 530 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 SUDS3Q9H7L9 328 aaPredicted RBP14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 RHBDL2Q9NX52 303 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 KCNK4Q9NYG8 393 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 TMEM216Q9P0N5 145 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 TUBGCP4Q9UGJ1 667 aa14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 HBS1LQ9Y450 684 aaKnown RBP14.78□□□□□ -0.04
TNFRSF1B-201ENST00000376259 KPNA7A9QM74 516 aa14.77□□□□□ -0.04
TNFRSF1B-201ENST00000376259 KIF3CO14782 793 aa14.77□□□□□ -0.04
TNFRSF1B-201ENST00000376259 PLA2G6O60733 806 aa14.77□□□□□ -0.04
TNFRSF1B-201ENST00000376259 GLRA3O75311 464 aa14.77□□□□□ -0.04
TNFRSF1B-201ENST00000376259 DDNO94850 711 aaPredicted RBP14.77□□□□□ -0.04
TNFRSF1B-201ENST00000376259 KLHL2O95198 593 aa14.77□□□□□ -0.04
TNFRSF1B-201ENST00000376259 PEX2P28328 305 aa14.77□□□□□ -0.04
TNFRSF1B-201ENST00000376259 SLC6A3Q01959 620 aa14.77□□□□□ -0.04
TNFRSF1B-201ENST00000376259 ACAP1Q15027 740 aa14.77□□□□□ -0.04
TNFRSF1B-201ENST00000376259 TDRPQ86YL5 185 aa14.77□□□□□ -0.04
TNFRSF1B-201ENST00000376259 PNPLA1Q8N8W4 532 aa14.77□□□□□ -0.04
TNFRSF1B-201ENST00000376259 RUVBL2Q9Y230 463 aaKnown RBP14.77□□□□□ -0.04
TNFRSF1B-201ENST00000376259 MAFBQ9Y5Q3 323 aaPredicted RBP14.77□□□□□ -0.04
TNFRSF1B-201ENST00000376259 ATP6AP2A0A1C7CYW4 349 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SOWAHBA6NEL2 793 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 TSPAN3O60637 253 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 ATP6AP2O75787 350 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 BPGMP07738 259 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CCR10P46092 362 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 LRRC8EQ6NSJ5 796 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 TRIM67Q6ZTA4 783 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SPNS2Q8IVW8 549 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 MAB21L3Q8N8X9 362 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 TDRD5Q8NAT2 981 aaKnown RBP14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 APPL2Q8NEU8 664 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SHKBP1Q8TBC3 707 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 EMID1Q96A84 441 aaPredicted RBP14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 MFSD3Q96ES6 412 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 ZNF333Q96JL9 665 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 EBF3Q9H4W6 596 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PIF1Q9H611 641 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 TMEM134Q9H6X4 195 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SSX2IPQ9Y2D8 614 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 BHMG1C9JSJ3 638 aaPredicted RBP14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 DLDP09622 509 aaKnown RBP14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 GSTT1P30711 240 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SPRP35270 261 aaPredicted RBP14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 GPD2P43304 727 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 TPD52P55327 224 aaPredicted RBP14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PDK2Q15119 407 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 MAP3K21Q5TCX8 1036 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 MYLK4Q86YV6 388 aaPredicted RBP14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 TP53INP2Q8IXH6 220 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 AGAP2Q99490 1192 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 CAAP1Q9H8G2 361 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SIX4Q9UIU6 781 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 STAP1Q9ULZ2 295 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 ARHGAP26Q9UNA1 814 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 NUMBLQ9Y6R0 609 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 LAMB1P07942 1786 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 PHLPP1O60346 1717 aa14.77□□□□□ -0.05
TNFRSF1B-201ENST00000376259 MYOCOSA0A1B0GUC4 107 aa14.76□□□□□ -0.05
TNFRSF1B-201ENST00000376259 SLC15A5A6NIM6 579 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms