RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 ALG3Q92685 438 aa13.96□□□□□ -0.17
C9orf47-203ENST00000375851 LRRC39Q96DD0 335 aa13.96□□□□□ -0.17
C9orf47-203ENST00000375851 APOPT1Q96IL0 206 aa13.96□□□□□ -0.17
C9orf47-203ENST00000375851 KREMEN1Q96MU8 473 aa13.96□□□□□ -0.17
C9orf47-203ENST00000375851 THUMPD3Q9BV44 507 aaKnown RBP13.96□□□□□ -0.17
C9orf47-203ENST00000375851 SNRNP25Q9BV90 132 aaKnown RBP13.96□□□□□ -0.17
C9orf47-203ENST00000375851 CIPCQ9C0C6 399 aa13.96□□□□□ -0.17
C9orf47-203ENST00000375851 RXFP1Q9HBX9 757 aa13.96□□□□□ -0.17
C9orf47-203ENST00000375851 SPASTQ9UBP0 616 aa13.96□□□□□ -0.17
C9orf47-203ENST00000375851 OR12D3Q9UGF7 316 aa13.96□□□□□ -0.17
C9orf47-203ENST00000375851 ERI2A8K979 691 aaKnown RBP13.96□□□□□ -0.17
C9orf47-203ENST00000375851 LIASO43766 372 aa13.96□□□□□ -0.17
C9orf47-203ENST00000375851 ARF4P18085 180 aaPredicted RBP13.96□□□□□ -0.17
C9orf47-203ENST00000375851 KCNA3P22001 575 aa13.96□□□□□ -0.17
C9orf47-203ENST00000375851 MZF1P28698 734 aaPredicted RBP13.96□□□□□ -0.17
C9orf47-203ENST00000375851 ATP6V1E1P36543 226 aa13.96□□□□□ -0.17
C9orf47-203ENST00000375851 BTG3Q14201 252 aaPredicted RBP13.96□□□□□ -0.17
C9orf47-203ENST00000375851 NPY5RQ15761 445 aa13.96□□□□□ -0.17
C9orf47-203ENST00000375851 SLC45A4Q5BKX6 768 aa13.96□□□□□ -0.17
C9orf47-203ENST00000375851 SPDYCQ5MJ68 293 aa13.96□□□□□ -0.17
C9orf47-203ENST00000375851 OTUB1Q96FW1 271 aaPredicted RBP13.96□□□□□ -0.17
C9orf47-203ENST00000375851 CNDP1Q96KN2 507 aa13.96□□□□□ -0.17
C9orf47-203ENST00000375851 RBBP8Q99708 897 aa13.96□□□□□ -0.17
C9orf47-203ENST00000375851 SOX13Q9UN79 622 aa13.96□□□□□ -0.17
C9orf47-203ENST00000375851 MYO1GB0I1T2 1018 aa13.96□□□□□ -0.18
C9orf47-203ENST00000375851 KCNA4P22459 653 aa13.96□□□□□ -0.18
C9orf47-203ENST00000375851 VHLP40337 213 aa13.96□□□□□ -0.18
C9orf47-203ENST00000375851 DRG2P55039 364 aaKnown RBP13.96□□□□□ -0.18
C9orf47-203ENST00000375851 CCDC15Q0P6D6 951 aa13.96□□□□□ -0.18
C9orf47-203ENST00000375851 GRTP1Q5TC63 336 aa13.96□□□□□ -0.18
C9orf47-203ENST00000375851 ZNF470Q6ECI4 717 aa13.96□□□□□ -0.18
C9orf47-203ENST00000375851 NPNTQ6UXI9 565 aa13.96□□□□□ -0.18
C9orf47-203ENST00000375851 ANKRD52Q8NB46 1076 aa13.96□□□□□ -0.18
C9orf47-203ENST00000375851 ATXN2LQ8WWM7 1075 aaKnown RBP13.96□□□□□ -0.18
C9orf47-203ENST00000375851 FAM162AQ96A26 154 aa13.96□□□□□ -0.18
C9orf47-203ENST00000375851 FMN2Q9NZ56 1722 aa13.96□□□□□ -0.18
C9orf47-203ENST00000375851 ZBTB22O15209 634 aa13.96□□□□□ -0.18
C9orf47-203ENST00000375851 SPTLC1O15269 473 aa13.96□□□□□ -0.18
C9orf47-203ENST00000375851 LZTS3O60299 673 aaPredicted RBP13.96□□□□□ -0.18
C9orf47-203ENST00000375851 TRIM13O60858 407 aa13.96□□□□□ -0.18
C9orf47-203ENST00000375851 ZNF135P52742 658 aaPredicted RBP13.96□□□□□ -0.18
C9orf47-203ENST00000375851 PCBP1Q15365 356 aaKnown RBP eCLIP13.96□□□□□ -0.18
C9orf47-203ENST00000375851 SDE2Q6IQ49 451 aa13.96□□□□□ -0.18
C9orf47-203ENST00000375851 SCUBE1Q8IWY4 988 aa13.96□□□□□ -0.18
C9orf47-203ENST00000375851 B3GALNT2Q8NCR0 500 aa13.96□□□□□ -0.18
C9orf47-203ENST00000375851 UCMAQ8WVF2 138 aa13.96□□□□□ -0.18
C9orf47-203ENST00000375851 RNF157Q96PX1 679 aa13.96□□□□□ -0.18
C9orf47-203ENST00000375851 BATF3Q9NR55 127 aa13.96□□□□□ -0.18
C9orf47-203ENST00000375851 GOLGA8TH3BQL2 631 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 TSPAN3O60637 253 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 RTN3O95197 1032 aaPredicted RBP13.95□□□□□ -0.18
C9orf47-203ENST00000375851 MT-CO1P00395 513 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 SERPINE1P05121 402 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 TPBGLP0DKB5 382 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 MYL4P12829 197 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 RAG1P15918 1043 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 ADRA1DP25100 572 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 RPL22P35268 128 aaKnown RBP13.95□□□□□ -0.18
C9orf47-203ENST00000375851 SPANXN3Q5MJ09 141 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 ZNF555Q8NEP9 628 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 APBA2Q99767 749 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 MRPL9Q9BYD2 267 aaKnown RBP13.95□□□□□ -0.18
C9orf47-203ENST00000375851 ETNK2Q9NVF9 386 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 CTNNAL1Q9UBT7 734 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 SLC25A13Q9UJS0 675 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 EIF3LQ9Y262 564 aaKnown RBP13.95□□□□□ -0.18
C9orf47-203ENST00000375851 PCDHB12Q9Y5F1 795 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 IGKV6D-41A0A0C4DH26 115 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 DDHD2O94830 711 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 WEE1P30291 646 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 PARP6Q2NL67 630 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 NBPF20Q3BBV1 942 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 GALNTL6Q49A17 601 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 BBS12Q6ZW61 710 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 ITIH5Q86UX2 942 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 TDRD5Q8NAT2 981 aaKnown RBP13.95□□□□□ -0.18
C9orf47-203ENST00000375851 CYGBQ8WWM9 190 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 PHF21BQ96EK2 531 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 EMILIN2Q9BXX0 1053 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 ABCC13Q9NSE7 274 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 IGLV3-22A0A075B6J6 115 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 TRDMT1O14717 391 aaKnown RBP13.95□□□□□ -0.18
C9orf47-203ENST00000375851 FSCN2O14926 492 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 MPOP05164 745 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 TUFMP49411 452 aaKnown RBP13.95□□□□□ -0.18
C9orf47-203ENST00000375851 ZNF284Q2VY69 593 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 LGI2Q8N0V4 545 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 C12orf29Q8N999 325 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 TMEM161AQ9NX61 479 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 MARCH2Q9P0N8 246 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 TAGLN3Q9UI15 199 aa13.95□□□□□ -0.18
C9orf47-203ENST00000375851 PRR23AA6NEV1 266 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 TNFRSF8P28908 595 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 NME5P56597 212 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 SKOR1P84550 965 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 CYLC2Q14093 348 aaPredicted RBP13.94□□□□□ -0.18
C9orf47-203ENST00000375851 HIST2H2ACQ16777 129 aaPredicted RBP13.94□□□□□ -0.18
C9orf47-203ENST00000375851 CACHD1Q5VU97 1274 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 PDPK2PQ6A1A2 396 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 HIST2H2AA3Q6FI13 130 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms