RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 RGS18Q9NS28 235 aa17.56■□□□□ 0.4
MCF2L-203ENST00000375604 KIAA1257Q9ULG3 409 aa17.56■□□□□ 0.4
MCF2L-203ENST00000375604 NYAP1Q6ZVC0 841 aa17.56■□□□□ 0.4
MCF2L-203ENST00000375604 CSGALNACT1Q8TDX6 532 aa17.56■□□□□ 0.4
MCF2L-203ENST00000375604 AHCYL2Q96HN2 611 aaKnown RBP17.56■□□□□ 0.4
MCF2L-203ENST00000375604 RSPH9Q9H1X1 276 aaPredicted RBP17.56■□□□□ 0.4
MCF2L-203ENST00000375604 DNAJC5Q9H3Z4 198 aa17.56■□□□□ 0.4
MCF2L-203ENST00000375604 CCDC134Q9H6E4 229 aa17.56■□□□□ 0.4
MCF2L-203ENST00000375604 KRT84Q9NSB2 600 aa17.56■□□□□ 0.4
MCF2L-203ENST00000375604 DEPDC5O75140 1603 aa17.56■□□□□ 0.4
MCF2L-203ENST00000375604 NWD1Q149M9 1564 aa17.56■□□□□ 0.4
MCF2L-203ENST00000375604 TOMM20Q15388 145 aa17.56■□□□□ 0.4
MCF2L-203ENST00000375604 PCYT1AP49585 367 aa17.56■□□□□ 0.4
MCF2L-203ENST00000375604 AASDHQ4L235 1098 aaPredicted RBP17.56■□□□□ 0.4
MCF2L-203ENST00000375604 BBS7Q8IWZ6 715 aa17.56■□□□□ 0.4
MCF2L-203ENST00000375604 POMKQ9H5K3 350 aa17.56■□□□□ 0.4
MCF2L-203ENST00000375604 TRIP4Q15650 581 aaPredicted RBP17.55■□□□□ 0.4
MCF2L-203ENST00000375604 ARHGAP17Q68EM7 881 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 ZNF470Q6ECI4 717 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 MFSD7Q6UXD7 560 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 NECAB2Q7Z6G3 386 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 CASP10Q92851 521 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 EMID1Q96A84 441 aaPredicted RBP17.55■□□□□ 0.4
MCF2L-203ENST00000375604 TBC1D13Q9NVG8 400 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.55■□□□□ 0.4
MCF2L-203ENST00000375604 VPS9D1Q9Y2B5 631 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 MROH2AA6NES4 1674 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 SAC3D1A6NKF1 404 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 ZCCHC18P0CG32 403 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 FAM83AQ86UY5 434 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 HTR3CQ8WXA8 447 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 GFM2Q969S9 779 aaKnown RBP17.55■□□□□ 0.4
MCF2L-203ENST00000375604 ABCG8Q9H221 673 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 FAM50BQ9Y247 325 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 SPACA6W5XKT8 324 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 MROH7Q68CQ1 1323 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 C16orf96A6NNT2 1141 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 RGS5O15539 181 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 TIMM44O43615 452 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 HNRNPCP07910 306 aaKnown RBP eCLIP17.55■□□□□ 0.4
MCF2L-203ENST00000375604 TCF3P15923 654 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 SERPINB10P48595 397 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 THG1LQ9NWX6 298 aaKnown RBP17.55■□□□□ 0.4
MCF2L-203ENST00000375604 NAALADL1Q9UQQ1 740 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 GSNP06396 782 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 MMRN1Q13201 1228 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 CELF3Q5SZQ8 465 aaKnown RBP17.55■□□□□ 0.4
MCF2L-203ENST00000375604 C16orf46Q6P387 395 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 ZNF438Q7Z4V0 828 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 SPATA6LQ8N4H0 392 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 MID1IP1Q9NPA3 183 aa17.55■□□□□ 0.4
MCF2L-203ENST00000375604 SLC26A2P50443 739 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 ST3GAL1Q11201 340 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 ITGA9Q13797 1035 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 RASA2Q15283 850 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 TMEM119Q4V9L6 283 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 SLC41A1Q8IVJ1 513 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 ABHD16BQ9H3Z7 469 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 KANSL3Q9P2N6 904 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 KRT16P08779 473 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 RBL1P28749 1068 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 MIPP30301 263 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 YWHAZP63104 245 aaKnown RBP17.54■□□□□ 0.4
MCF2L-203ENST00000375604 ZSCAN18Q8TBC5 510 aaPredicted RBP17.54■□□□□ 0.4
MCF2L-203ENST00000375604 DLGAP2Q9P1A6 1054 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 PPIEQ9UNP9 301 aaKnown RBP17.54■□□□□ 0.4
MCF2L-203ENST00000375604 APOA1P02647 267 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 APOA4P06727 396 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 FEN1P39748 380 aaKnown RBP17.54■□□□□ 0.4
MCF2L-203ENST00000375604 FAM183BPQ6ZVS7 135 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 KRT78Q8N1N4 520 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 SENP8Q96LD8 212 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 TMEM237Q96Q45 408 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 ZNF518BQ9C0D4 1074 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 DMAP1Q9NPF5 467 aaPredicted RBP17.54■□□□□ 0.4
MCF2L-203ENST00000375604 BTN3A1O00481 513 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 NUDT14O95848 222 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 ZNF697Q5TEC3 545 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 NAT16Q8N8M0 369 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 CLIP3Q96DZ5 547 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 WDR18Q9BV38 432 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 MFSD1Q9H3U5 465 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 CYP3A43Q9HB55 503 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 ACOT9Q9Y305 439 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 LSM8O95777 96 aaKnown RBP17.54■□□□□ 0.4
MCF2L-203ENST00000375604 ZC3H12AQ5D1E8 599 aaKnown RBP17.54■□□□□ 0.4
MCF2L-203ENST00000375604 RGL4Q8IZJ4 473 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 FBXO44Q9H4M3 255 aa17.54■□□□□ 0.4
MCF2L-203ENST00000375604 CAB39Q9Y376 341 aaPredicted RBP17.54■□□□□ 0.4
MCF2L-203ENST00000375604 B4GALT5O43286 388 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 FAM124AQ86V42 546 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 TEX9Q8N6V9 391 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 ANKRD7Q92527 254 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 MIR1-1HGQ9H1L0 117 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 RARAP10276 462 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 DSG1Q02413 1049 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 FNDC5Q8NAU1 212 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 TBC1D3BA6NDS4 549 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 SEC22BO75396 215 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 TSPAN8P19075 237 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms