RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 ASGR1P07306 291 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 LINGO3P0C6S8 592 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 CREB1P16220 341 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 TFE3P19532 575 aaPredicted RBP8.47□□□□□ -1.05
UBR4-202ENST00000375224 SSTR1P30872 391 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 FDFT1P37268 417 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 ELK3P41970 407 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 CLCNKBP51801 687 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 MAP3K7CLP57077 242 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 CDK16Q00536 496 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 PTK7Q13308 1070 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 MSS51Q4VC12 460 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 NUGGCQ68CJ6 796 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 TRIM68Q6AZZ1 485 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 AGMOQ6ZNB7 445 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 CAPN12Q6ZSI9 719 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 FAM35AQ86V20 835 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 CCDC185Q8N715 623 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 KLHDC9Q8NEP7 349 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 TFB1MQ8WVM0 346 aaKnown RBP8.47□□□□□ -1.05
UBR4-202ENST00000375224 NTAN1Q96AB6 310 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 SMARCD1Q96GM5 515 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 DHRS4Q9BTZ2 278 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 VCXQ9H320 206 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 ABT1Q9ULW3 272 aaKnown RBP8.47□□□□□ -1.05
UBR4-202ENST00000375224 PADI3Q9ULW8 664 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 GABRQQ9UN88 632 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 TEX264Q9Y6I9 313 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 CASP8AP2Q9UKL3 1982 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 TCP11X1B4DZS4 312 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 M0QYT0 321 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 CLDN5O00501 218 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 SUN1O94901 812 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 GHRP10912 638 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 SCNN1GP51170 649 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 LRRC14Q15048 493 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 KCNA10Q16322 511 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 UPP1Q16831 310 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 PUS10Q3MIT2 529 aaKnown RBP8.47□□□□□ -1.05
UBR4-202ENST00000375224 ARL13BQ3SXY8 428 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 LGSNQ5TDP6 509 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 BNIPLQ7Z465 357 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 FAM131BQ86XD5 332 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 IRGQQ8WZA9 623 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 PAFAH2Q99487 392 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 ELAC2Q9BQ52 826 aaKnown RBP8.47□□□□□ -1.05
UBR4-202ENST00000375224 XAB2Q9HCS7 855 aaKnown RBP8.47□□□□□ -1.05
UBR4-202ENST00000375224 CRTAC1Q9NQ79 661 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 CHMP2BQ9UQN3 213 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 NOD1Q9Y239 953 aa8.47□□□□□ -1.05
UBR4-202ENST00000375224 A0A0U1RQF3 1178 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 EIF4E1BA6NMX2 242 aaKnown RBP8.46□□□□□ -1.05
UBR4-202ENST00000375224 LSM1O15116 133 aaKnown RBP8.46□□□□□ -1.05
UBR4-202ENST00000375224 ZWINTO95229 277 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 HNRNPCP07910 306 aaKnown RBP eCLIP8.46□□□□□ -1.05
UBR4-202ENST00000375224 ALOX15P16050 662 aaPredicted RBP8.46□□□□□ -1.05
UBR4-202ENST00000375224 DAOAP59103 153 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 YWHAGP61981 247 aaKnown RBP eCLIP8.46□□□□□ -1.05
UBR4-202ENST00000375224 CACNB2Q08289 660 aaPredicted RBP8.46□□□□□ -1.05
UBR4-202ENST00000375224 PDK1Q15118 436 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 TAF11Q15544 211 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 MAPRE1Q15691 268 aaKnown RBP8.46□□□□□ -1.05
UBR4-202ENST00000375224 SEPT7Q16181 437 aaKnown RBP8.46□□□□□ -1.05
UBR4-202ENST00000375224 PKN2Q16513 984 aaKnown RBP8.46□□□□□ -1.05
UBR4-202ENST00000375224 KCNT2Q6UVM3 1135 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 TAB3Q8N5C8 712 aaPredicted RBP8.46□□□□□ -1.05
UBR4-202ENST00000375224 APBB2Q92870 758 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 TGS1Q96RS0 853 aaKnown RBP8.46□□□□□ -1.05
UBR4-202ENST00000375224 ACBD6Q9BR61 282 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 ETNK1Q9HBU6 452 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 MIOSQ9NXC5 875 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 ATXN10Q9UBB4 475 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 RABL2AQ9UBK7 228 aaPredicted RBP8.46□□□□□ -1.05
UBR4-202ENST00000375224 PDLIM1O00151 329 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 BANF1O75531 89 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 DGKIO75912 1065 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 CYP11A1P05108 521 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 INHBAP08476 426 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 AMPD1P23109 780 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 ATXN1P54253 815 aaKnown RBP8.46□□□□□ -1.05
UBR4-202ENST00000375224 GBE1Q04446 702 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 GAD2Q05329 585 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 CBX3Q13185 183 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 DSC3Q14574 896 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 TSNAXIP1Q2TAA8 658 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 LACTB2Q53H82 288 aaPredicted RBP8.46□□□□□ -1.05
UBR4-202ENST00000375224 RAB41Q5JT25 222 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 FAM26DQ5JW98 314 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 NCBP2-AS2Q69YL0 99 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 REM2Q8IYK8 340 aaPredicted RBP8.46□□□□□ -1.05
UBR4-202ENST00000375224 THEM5Q8N1Q8 247 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 GDAP1Q8TB36 358 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 RNF139Q8WU17 664 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 HTR3CQ8WXA8 447 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 LPPQ93052 612 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 PGAP3Q96FM1 320 aaPredicted RBP8.46□□□□□ -1.05
UBR4-202ENST00000375224 ULBP1Q9BZM6 244 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 EBF2Q9HAK2 575 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 DTLQ9NZJ0 730 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 USP15Q9Y4E8 981 aaPredicted RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms