RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 IRAK2O43187 625 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 STK10O94804 968 aaKnown RBP18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 METTL18O95568 372 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 AMHP03971 560 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 ATP2A2P16615 1042 aaKnown RBP18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 ERCC2P18074 760 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 FGFR3P22607 806 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 FDFT1P37268 417 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 MAGEA3P43357 314 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 HNRNPH2P55795 449 aaKnown RBP18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 TCTN1Q2MV58 587 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 KLHL38Q2WGJ6 581 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 ARHGEF18Q6ZSZ5 1173 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 ANKRD33Q7Z3H0 272 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 NLRP14Q86W24 1093 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 LRRC39Q96DD0 335 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 DHRS4Q9BTZ2 278 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 BRD8Q9H0E9 1235 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 TKTL2Q9H0I9 626 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 ARHGEF38Q9NXL2 777 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 ABI2Q9NYB9 513 aaPredicted RBP18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 GMNCA6NCL1 334 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 OPHN1O60890 802 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 FAM107AO95990 144 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 SSTR1P30872 391 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 ELK3P41970 407 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 ANKRD20A2Q5SQ80 823 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 ANKRD20A1Q5TYW2 823 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 ANKRD20A3Q5VUR7 823 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 BTBD8Q5XKL5 378 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 ZNF280DQ6N043 979 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 SCD5Q86SK9 330 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 PALM2Q8IXS6 379 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 LRRN4Q8WUT4 740 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 LGMNQ99538 433 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 PSMC3IPQ9P2W1 217 aaPredicted RBP18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 SCML2Q9UQR0 700 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 PCDHB5Q9Y5E4 795 aa18.57■□□□□ 0.56
HLA-DQB1-201ENST00000374943 DOCK4Q8N1I0 1966 aa18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 LTBP2Q14767 1821 aa18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 NDUFAB1O14561 156 aa18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 PQBP1O60828 265 aaKnown RBP18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 APRTP07741 180 aa18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 CCL5P13501 91 aa18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 HTR7P34969 479 aa18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 SLC11A1P49279 550 aa18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 GEMIN4P57678 1058 aaKnown RBP18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 CDK16Q00536 496 aa18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 ELAVL2Q12926 359 aaKnown RBP18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 TMED2Q15363 201 aa18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 MTFR1Q15390 333 aa18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 CTXN3Q4LDR2 81 aa18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 FAXCQ5TGI0 409 aa18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 FAM171A1Q5VUB5 890 aa18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 C3orf62Q6ZUJ4 267 aa18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 CAND1Q86VP6 1230 aaKnown RBP18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 P2RY11Q96G91 374 aa18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 PRDM12Q9H4Q4 367 aa18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 PPANQ9NQ55 473 aaKnown RBP18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 EIF2B3Q9NR50 452 aaKnown RBP18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 INTS9Q9NV88 658 aaKnown RBP18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 SENP1Q9P0U3 644 aa18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 CHMP2BQ9UQN3 213 aa18.56■□□□□ 0.56
HLA-DQB1-201ENST00000374943 RNF103O00237 685 aa18.55■□□□□ 0.56
HLA-DQB1-201ENST00000374943 ALDH2P05091 517 aa18.55■□□□□ 0.56
HLA-DQB1-201ENST00000374943 GATMP50440 423 aa18.55■□□□□ 0.56
HLA-DQB1-201ENST00000374943 SEC24CP53992 1094 aa18.55■□□□□ 0.56
HLA-DQB1-201ENST00000374943 FOXR1Q6PIV2 292 aa18.55■□□□□ 0.56
HLA-DQB1-201ENST00000374943 CAPN12Q6ZSI9 719 aa18.55■□□□□ 0.56
HLA-DQB1-201ENST00000374943 ZNF534Q76KX8 674 aa18.55■□□□□ 0.56
HLA-DQB1-201ENST00000374943 TRABD2AQ86V40 505 aa18.55■□□□□ 0.56
HLA-DQB1-201ENST00000374943 IGDCC3Q8IVU1 814 aa18.55■□□□□ 0.56
HLA-DQB1-201ENST00000374943 SCN4BQ8IWT1 228 aa18.55■□□□□ 0.56
HLA-DQB1-201ENST00000374943 NUP93Q8N1F7 819 aa18.55■□□□□ 0.56
HLA-DQB1-201ENST00000374943 AGGF1Q8N302 714 aaeCLIP18.55■□□□□ 0.56
HLA-DQB1-201ENST00000374943 HAPLN3Q96S86 360 aa18.55■□□□□ 0.56
HLA-DQB1-201ENST00000374943 CCT8L2Q96SF2 557 aa18.55■□□□□ 0.56
HLA-DQB1-201ENST00000374943 OXCT2Q9BYC2 517 aaPredicted RBP18.55■□□□□ 0.56
HLA-DQB1-201ENST00000374943 GPR62Q9BZJ7 368 aa18.55■□□□□ 0.56
HLA-DQB1-201ENST00000374943 FBXO44Q9H4M3 255 aa18.55■□□□□ 0.56
HLA-DQB1-201ENST00000374943 XAB2Q9HCS7 855 aaKnown RBP18.55■□□□□ 0.56
HLA-DQB1-201ENST00000374943 IL37Q9NZH6 218 aa18.55■□□□□ 0.56
HLA-DQB1-201ENST00000374943 OR12D3Q9UGF7 316 aa18.55■□□□□ 0.56
HLA-DQB1-201ENST00000374943 TBK1Q9UHD2 729 aa18.55■□□□□ 0.56
HLA-DQB1-201ENST00000374943 TMEM120BA0PK00 339 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 POC1B-GALNT4F8VUJ3 575 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 LRIG2O94898 1065 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 GSTA2P09210 222 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 BRAFP15056 766 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 MX2P20592 715 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 SERPINB6P35237 376 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 PPIDQ08752 370 aaKnown RBP18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 AP1B1Q10567 949 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 WASHC5Q12768 1159 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 SMARCB1Q12824 385 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 PPP2R5DQ14738 602 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 MSANTD2Q6P1R3 559 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 FUT10Q6P4F1 479 aa18.54■□□□□ 0.56
HLA-DQB1-201ENST00000374943 MON1AQ86VX9 555 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms