RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 GSDMBQ8TAX9 411 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 RAB3IL1Q8TBN0 382 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 SOCS4Q8WXH5 440 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 SEPT1Q8WYJ6 367 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 KATNBL1Q9H079 304 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 MIS12Q9H081 205 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 SDCBP2Q9H190 292 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 ZNF302Q9NR11 478 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 PNPOQ9NVS9 261 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 SORCS3Q9UPU3 1222 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 KIAA1217Q5T5P2 1943 aa11.43□□□□□ -0.58
CCDC40-203ENST00000374877 M0QYV0 167 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 CCNT2O60583 730 aaKnown RBP11.42□□□□□ -0.58
CCDC40-203ENST00000374877 HMGCRP04035 888 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 CDK18Q07002 472 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 CAPSQ13938 189 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 FAM47CQ5HY64 1035 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 UNC5BQ8IZJ1 945 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 PPP4R1Q8TF05 950 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 MPP4Q96JB8 637 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 MKS1Q9NXB0 559 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 PACSIN3Q9UKS6 424 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 POMPQ9Y244 141 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 DOCK5Q9H7D0 1870 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 ARL2P36404 184 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 CHN2P52757 468 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 CRHR2Q13324 411 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 TUBB3Q13509 450 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 TEDDM1Q5T9Z0 273 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 PDPK2PQ6A1A2 396 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 TMEM130Q8N3G9 435 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 PLD5Q8N7P1 536 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 JADE3Q92613 823 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 EMID1Q96A84 441 aaPredicted RBP11.42□□□□□ -0.58
CCDC40-203ENST00000374877 RNF157Q96PX1 679 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 FRMD8Q9BZ67 464 aaPredicted RBP11.42□□□□□ -0.58
CCDC40-203ENST00000374877 DHX33Q9H6R0 707 aaKnown RBP11.42□□□□□ -0.58
CCDC40-203ENST00000374877 C15orf38-AP3S2A0A0A6YYH1 394 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 E2F8A0AVK6 867 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 CAPN8A6NHC0 703 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 ARIH2O95376 493 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 SRGAP2CP0DJJ0 459 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 PDGFRAP16234 1089 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 GRIA1P42261 906 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 FOLH1Q04609 750 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 TBL3Q12788 808 aaKnown RBP11.42□□□□□ -0.58
CCDC40-203ENST00000374877 TMEM132AQ24JP5 1023 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 ANKRD20A4Q4UJ75 823 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 MAP3K21Q5TCX8 1036 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 MBLAC2Q68D91 279 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 TAPT1Q6NXT6 567 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 ARPINQ7Z6K5 226 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 SDCCAG8Q86SQ7 713 aaPredicted RBP11.42□□□□□ -0.58
CCDC40-203ENST00000374877 CDR2LQ86X02 465 aaPredicted RBP11.42□□□□□ -0.58
CCDC40-203ENST00000374877 UBA3Q8TBC4 463 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 APBB2Q92870 758 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 ZNF668Q96K58 619 aaPredicted RBP11.42□□□□□ -0.58
CCDC40-203ENST00000374877 TINF2Q9BSI4 451 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 LHX5Q9H2C1 402 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 NGRNQ9NPE2 291 aaKnown RBP11.42□□□□□ -0.58
CCDC40-203ENST00000374877 ATXN10Q9UBB4 475 aa11.42□□□□□ -0.58
CCDC40-203ENST00000374877 APOL1O14791 398 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 TNNC2P02585 160 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 SERPINB9P50453 376 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 PPP6R3Q5H9R7 873 aaPredicted RBP11.41□□□□□ -0.58
CCDC40-203ENST00000374877 OR6B2Q6IFH4 312 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 FBXL19Q6PCT2 694 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 EEPD1Q7L9B9 569 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 RXFP2Q8WXD0 754 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 HMGXB4Q9UGU5 601 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 INPP5FQ9Y2H2 1132 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 TBC1D30Q9Y2I9 924 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 ARID2Q68CP9 1835 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 WDR81Q562E7 1941 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 DCXO43602 365 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 ADCY3O60266 1144 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 MICAL2O94851 1124 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 SNAI1O95863 264 aaPredicted RBP11.41□□□□□ -0.58
CCDC40-203ENST00000374877 TXNP10599 105 aaKnown RBP11.41□□□□□ -0.58
CCDC40-203ENST00000374877 FGF3P11487 239 aaPredicted RBP11.41□□□□□ -0.58
CCDC40-203ENST00000374877 GPD1P21695 349 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 IDH3AP50213 366 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 APLP1P51693 650 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 LAMC2Q13753 1193 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 LY6KQ17RY6 165 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 DEFB115Q30KQ5 88 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 OLFML2BQ68BL8 750 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 MAP7D3Q8IWC1 876 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 ACTRT2Q8TDY3 377 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 CMTM5Q96DZ9 223 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 DNAJC1Q96KC8 554 aaKnown RBP11.41□□□□□ -0.58
CCDC40-203ENST00000374877 FAM167AQ96KS9 214 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 TWNKQ96RR1 684 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 GPR20Q99678 358 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 EBNA1BP2Q99848 306 aaKnown RBP11.41□□□□□ -0.58
CCDC40-203ENST00000374877 XYLT2Q9H1B5 865 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 ABHD16BQ9H3Z7 469 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 ITGA11Q9UKX5 1188 aa11.41□□□□□ -0.58
CCDC40-203ENST00000374877 G3BP2Q9UN86 482 aaKnown RBP11.41□□□□□ -0.58
CCDC40-203ENST00000374877 DTNAQ9Y4J8 743 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms