RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 LRRC38Q5VT99 294 aa13.27□□□□□ -0.28
PRPF4-201ENST00000374198 C16orf89Q6UX73 402 aa13.27□□□□□ -0.28
PRPF4-201ENST00000374198 NIM1KQ8IY84 436 aa13.27□□□□□ -0.28
PRPF4-201ENST00000374198 CYP2W1Q8TAV3 490 aa13.27□□□□□ -0.28
PRPF4-201ENST00000374198 ACTL9Q8TC94 416 aa13.27□□□□□ -0.28
PRPF4-201ENST00000374198 TAS1R2Q8TE23 839 aa13.27□□□□□ -0.28
PRPF4-201ENST00000374198 PDCD6IPQ8WUM4 868 aaKnown RBP13.27□□□□□ -0.28
PRPF4-201ENST00000374198 TANKQ92844 425 aa13.27□□□□□ -0.28
PRPF4-201ENST00000374198 ACSF2Q96CM8 615 aaPredicted RBP13.27□□□□□ -0.28
PRPF4-201ENST00000374198 ERLEC1Q96DZ1 483 aa13.27□□□□□ -0.28
PRPF4-201ENST00000374198 CFAP36Q96G28 342 aa13.27□□□□□ -0.28
PRPF4-201ENST00000374198 CXorf21Q9HAI6 301 aa13.27□□□□□ -0.28
PRPF4-201ENST00000374198 HOMER2Q9NSB8 354 aa13.27□□□□□ -0.28
PRPF4-201ENST00000374198 VPS28Q9UK41 221 aa13.27□□□□□ -0.28
PRPF4-201ENST00000374198 AP4S1Q9Y587 144 aa13.27□□□□□ -0.28
PRPF4-201ENST00000374198 PCDHB2Q9Y5E7 798 aa13.27□□□□□ -0.28
PRPF4-201ENST00000374198 PLIN4Q96Q06 1357 aa13.27□□□□□ -0.28
PRPF4-201ENST00000374198 GOLGA8IPA6NC78 632 aa13.27□□□□□ -0.29
PRPF4-201ENST00000374198 GOLGA8JA6NMD2 632 aa13.27□□□□□ -0.29
PRPF4-201ENST00000374198 ZNF195O14628 629 aa13.27□□□□□ -0.29
PRPF4-201ENST00000374198 KDM1AO60341 852 aa13.27□□□□□ -0.29
PRPF4-201ENST00000374198 GSRP00390 522 aa13.27□□□□□ -0.29
PRPF4-201ENST00000374198 FGF3P11487 239 aaPredicted RBP13.27□□□□□ -0.29
PRPF4-201ENST00000374198 PTPN2P17706 415 aa13.27□□□□□ -0.29
PRPF4-201ENST00000374198 PCYT1AP49585 367 aa13.27□□□□□ -0.29
PRPF4-201ENST00000374198 NDUFA5Q16718 116 aa13.27□□□□□ -0.29
PRPF4-201ENST00000374198 TRIM16LQ309B1 348 aa13.27□□□□□ -0.29
PRPF4-201ENST00000374198 ARL13BQ3SXY8 428 aa13.27□□□□□ -0.29
PRPF4-201ENST00000374198 ANKRD26P1Q6NSI1 321 aa13.27□□□□□ -0.29
PRPF4-201ENST00000374198 TRIM72Q6ZMU5 477 aa13.27□□□□□ -0.29
PRPF4-201ENST00000374198 BNC2Q6ZN30 1099 aaPredicted RBP13.27□□□□□ -0.29
PRPF4-201ENST00000374198 ADGRF2Q8IZF7 708 aa13.27□□□□□ -0.29
PRPF4-201ENST00000374198 DAW1Q8N136 415 aa13.27□□□□□ -0.29
PRPF4-201ENST00000374198 SLC15A4Q8N697 577 aa13.27□□□□□ -0.29
PRPF4-201ENST00000374198 FBXL13Q8NEE6 735 aa13.27□□□□□ -0.29
PRPF4-201ENST00000374198 ADAMTS16Q8TE57 1224 aa13.27□□□□□ -0.29
PRPF4-201ENST00000374198 SREK1Q8WXA9 508 aaKnown RBP13.27□□□□□ -0.29
PRPF4-201ENST00000374198 CCDC127Q96BQ5 260 aa13.27□□□□□ -0.29
PRPF4-201ENST00000374198 KLHL32Q96NJ5 620 aa13.27□□□□□ -0.29
PRPF4-201ENST00000374198 ACCSQ96QU6 501 aa13.27□□□□□ -0.29
PRPF4-201ENST00000374198 CTRCQ99895 268 aa13.27□□□□□ -0.29
PRPF4-201ENST00000374198 RTFDC1Q9BY42 306 aaPredicted RBP13.27□□□□□ -0.29
PRPF4-201ENST00000374198 VTA1Q9NP79 307 aa13.27□□□□□ -0.29
PRPF4-201ENST00000374198 DICER1Q9UPY3 1922 aaKnown RBP13.27□□□□□ -0.29
PRPF4-201ENST00000374198 TOP3BO95985 862 aaKnown RBP13.26□□□□□ -0.29
PRPF4-201ENST00000374198 LDHCP07864 332 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 P4HA1P13674 534 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 JAK1P23458 1154 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 ITGADQ13349 1161 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 AARS2Q5JTZ9 985 aaKnown RBP13.26□□□□□ -0.29
PRPF4-201ENST00000374198 TXNRD3NBQ6F5E7 133 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 SLC30A10Q6XR72 485 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 POLNQ7Z5Q5 900 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 IFNLR1Q8IU57 520 aaPredicted RBP13.26□□□□□ -0.29
PRPF4-201ENST00000374198 PTCD2Q8WV60 388 aaKnown RBP13.26□□□□□ -0.29
PRPF4-201ENST00000374198 LENG8Q96PV6 779 aaPredicted RBP13.26□□□□□ -0.29
PRPF4-201ENST00000374198 TMEM8AQ9HCN3 771 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 TIMM22Q9Y584 194 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 CHMP2AO43633 222 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 BCAS2O75934 225 aaPredicted RBP13.26□□□□□ -0.29
PRPF4-201ENST00000374198 DDNO94850 711 aaPredicted RBP13.26□□□□□ -0.29
PRPF4-201ENST00000374198 MCF2P10911 925 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 DCKP27707 260 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 RCVRNP35243 200 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 SREBF1P36956 1147 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 PSMC1P62191 440 aaKnown RBP13.26□□□□□ -0.29
PRPF4-201ENST00000374198 DYNLT1P63172 113 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 DSELQ8IZU8 1212 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 MYO1HQ8N1T3 1032 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 KYQ8NBH2 561 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 VCPIP1Q96JH7 1222 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 ANKRD60Q9BZ19 345 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 EHD1Q9H4M9 534 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 SLC30A1Q9Y6M5 507 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 IGKV6D-41A0A0C4DH26 115 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 TRIM64BA6NI03 449 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 PLOD2O00469 737 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 KPNA4O00629 521 aaPredicted RBP13.26□□□□□ -0.29
PRPF4-201ENST00000374198 RIMBP2O15034 1052 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 CAPN15O75808 1086 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 AKR1B1P15121 316 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 BTDP43251 543 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 RPL7AP62424 266 aaKnown RBP13.26□□□□□ -0.29
PRPF4-201ENST00000374198 RPL10AP62906 217 aaKnown RBP13.26□□□□□ -0.29
PRPF4-201ENST00000374198 CEACAM7Q14002 265 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 ATG14Q6ZNE5 492 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 OTOP1Q7RTM1 612 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 UNC45BQ8IWX7 931 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 CLIP3Q96DZ5 547 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 NACC1Q96RE7 527 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 SORT1Q99523 831 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 PARVBQ9HBI1 364 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 PARVAQ9NVD7 372 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 GPRC5DQ9NZD1 345 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 SNX9Q9Y5X1 595 aa13.26□□□□□ -0.29
PRPF4-201ENST00000374198 TMEM114B3SHH9 223 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 AVILO75366 819 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 UFL1O94874 794 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 CFHP08603 1231 aa13.25□□□□□ -0.29
PRPF4-201ENST00000374198 RPL10P27635 214 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms