RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 TMEM79Q9BSE2 394 aa14.67□□□□□ -0.06
TRAF1-201ENST00000373887 KLHL4Q9C0H6 718 aa14.67□□□□□ -0.06
TRAF1-201ENST00000373887 NOL6Q9H6R4 1146 aaKnown RBP14.67□□□□□ -0.06
TRAF1-201ENST00000373887 MRGBPQ9NV56 204 aa14.67□□□□□ -0.06
TRAF1-201ENST00000373887 ANXA9O76027 345 aa14.67□□□□□ -0.06
TRAF1-201ENST00000373887 CYP11B1P15538 503 aa14.67□□□□□ -0.06
TRAF1-201ENST00000373887 ITGB6P18564 788 aa14.67□□□□□ -0.06
TRAF1-201ENST00000373887 NOS3P29474 1203 aa14.67□□□□□ -0.06
TRAF1-201ENST00000373887 SLC26A2P50443 739 aa14.67□□□□□ -0.06
TRAF1-201ENST00000373887 CDH8P55286 799 aa14.67□□□□□ -0.06
TRAF1-201ENST00000373887 ADIGQ0VDE8 80 aa14.67□□□□□ -0.06
TRAF1-201ENST00000373887 IKBKEQ14164 716 aa14.67□□□□□ -0.06
TRAF1-201ENST00000373887 SLC25A24Q6NUK1 477 aa14.67□□□□□ -0.06
TRAF1-201ENST00000373887 ITIH5Q86UX2 942 aa14.67□□□□□ -0.06
TRAF1-201ENST00000373887 MYO1HQ8N1T3 1032 aa14.67□□□□□ -0.06
TRAF1-201ENST00000373887 SEPHS2Q99611 448 aa14.67□□□□□ -0.06
TRAF1-201ENST00000373887 DUSP12Q9UNI6 340 aa14.67□□□□□ -0.06
TRAF1-201ENST00000373887 PCDHB5Q9Y5E4 795 aa14.67□□□□□ -0.06
TRAF1-201ENST00000373887 TMEM253P0C7T8 217 aa14.67□□□□□ -0.06
TRAF1-201ENST00000373887 HALP42357 657 aa14.67□□□□□ -0.06
TRAF1-201ENST00000373887 SCNN1BP51168 640 aa14.67□□□□□ -0.06
TRAF1-201ENST00000373887 NDST1P52848 882 aa14.67□□□□□ -0.06
TRAF1-201ENST00000373887 WDR49Q8IV35 697 aa14.67□□□□□ -0.06
TRAF1-201ENST00000373887 CASKIN2Q8WXE0 1202 aa14.67□□□□□ -0.06
TRAF1-201ENST00000373887 EIF2B2P49770 351 aaKnown RBP14.66□□□□□ -0.06
TRAF1-201ENST00000373887 KPNB1Q14974 876 aaKnown RBP14.66□□□□□ -0.06
TRAF1-201ENST00000373887 PKN1Q16512 942 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 NT5DC3Q86UY8 548 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 CACTIN-AS1Q8N1I8 211 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 TDRD5Q8NAT2 981 aaKnown RBP14.66□□□□□ -0.06
TRAF1-201ENST00000373887 LRRC39Q96DD0 335 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 MED8Q96G25 268 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 TPD52L3Q96J77 140 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 PPP1R10Q96QC0 940 aaKnown RBP14.66□□□□□ -0.06
TRAF1-201ENST00000373887 PACSIN1Q9BY11 444 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 EFCAB1Q9HAE3 211 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 DYRK3O43781 588 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 FKTNO75072 461 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 CLTBP09497 229 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 MAPK1P28482 360 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 GEMP55040 296 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 STARD3Q14849 445 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 STN1Q9H668 368 aaKnown RBP14.66□□□□□ -0.06
TRAF1-201ENST00000373887 TMA7Q9Y2S6 64 aaKnown RBP14.66□□□□□ -0.06
TRAF1-201ENST00000373887 ELNP15502 786 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 MAGEA10P43363 369 aaPredicted RBP14.66□□□□□ -0.06
TRAF1-201ENST00000373887 EARS2Q5JPH6 523 aaKnown RBP14.66□□□□□ -0.06
TRAF1-201ENST00000373887 GATAD2AQ86YP4 633 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 REXO1L1PQ8IX06 675 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 POMGNT2Q8NAT1 580 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 NLGN2Q8NFZ4 835 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 ACOX2Q99424 681 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 KLHL3Q9UH77 587 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 MEI4A8MW99 385 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 AQP5P55064 265 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 C1DQ13901 141 aaKnown RBP14.66□□□□□ -0.06
TRAF1-201ENST00000373887 CCNIQ14094 377 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 TREML2Q5T2D2 321 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 PDPK2PQ6A1A2 396 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 IZUMO2Q6UXV1 221 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 GPR142Q7Z601 462 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 FAM228AQ86W67 206 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 LPPQ93052 612 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 TINF2Q9BSI4 451 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 TMEM120AQ9BXJ8 343 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 FANCEQ9HB96 536 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 KANSL3Q9P2N6 904 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 TUBGCP4Q9UGJ1 667 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 SALL1Q9NSC2 1324 aa14.66□□□□□ -0.06
TRAF1-201ENST00000373887 SSU72P8A0A1W2PR75 194 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 MRNIPQ6NTE8 343 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 CYP4Z2PQ8N1L4 340 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 FICDQ9BVA6 458 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 CYLDQ9NQC7 956 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 HES2Q9Y543 173 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 STON1Q9Y6Q2 735 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 FDFT1P37268 417 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 SLC27A1Q6PCB7 646 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 CATSPER2Q96P56 530 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 DEFB118Q96PH6 123 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 GAD1Q99259 594 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 ZMYND8Q9ULU4 1186 aaPredicted RBP14.65□□□□□ -0.06
TRAF1-201ENST00000373887 C1orf232A0A0U1RR37 186 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 FGFR1P11362 822 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 TNNI3P19429 210 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 CATSPERGQ6ZRH7 1159 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 CERS5Q8N5B7 392 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 NOA1Q8NC60 698 aaKnown RBP14.65□□□□□ -0.06
TRAF1-201ENST00000373887 PCDHGA4Q9Y5G9 962 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 KATNA1O75449 491 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 MUTP22033 750 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.65□□□□□ -0.06
TRAF1-201ENST00000373887 STX4Q12846 297 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 CRYMQ14894 314 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 PKN2Q16513 984 aaKnown RBP14.65□□□□□ -0.06
TRAF1-201ENST00000373887 SEL1L3Q68CR1 1132 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 CSGALNACT1Q8TDX6 532 aa14.65□□□□□ -0.06
TRAF1-201ENST00000373887 MRPL48Q96GC5 212 aaKnown RBP14.65□□□□□ -0.06
TRAF1-201ENST00000373887 PIH1D1Q9NWS0 290 aaKnown RBP14.65□□□□□ -0.06
TRAF1-201ENST00000373887 ZNF624Q9P2J8 865 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms