RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 HAPLN3Q96S86 360 aa16.21■□□□□ 0.19
HDAC8-209ENST00000373589 LGMNQ99538 433 aa16.21■□□□□ 0.19
HDAC8-209ENST00000373589 RAB6BQ9NRW1 208 aa16.21■□□□□ 0.19
HDAC8-209ENST00000373589 COMMD8Q9NX08 183 aa16.21■□□□□ 0.19
HDAC8-209ENST00000373589 GMIPQ9P107 970 aa16.21■□□□□ 0.19
HDAC8-209ENST00000373589 XPO7Q9UIA9 1087 aaKnown RBP16.21■□□□□ 0.19
HDAC8-209ENST00000373589 SNX10Q9Y5X0 201 aa16.21■□□□□ 0.19
HDAC8-209ENST00000373589 RAD54BQ9Y620 910 aa16.21■□□□□ 0.19
HDAC8-209ENST00000373589 CDY1Q9Y6F8 540 aa16.21■□□□□ 0.19
HDAC8-209ENST00000373589 RASGRF2O14827 1237 aa16.2■□□□□ 0.18
HDAC8-209ENST00000373589 ADAM12O43184 909 aa16.2■□□□□ 0.18
HDAC8-209ENST00000373589 LRIG2O94898 1065 aa16.2■□□□□ 0.18
HDAC8-209ENST00000373589 RTN3O95197 1032 aaPredicted RBP16.2■□□□□ 0.18
HDAC8-209ENST00000373589 CSF2RAP15509 400 aa16.2■□□□□ 0.18
HDAC8-209ENST00000373589 NR1D1P20393 614 aa16.2■□□□□ 0.18
HDAC8-209ENST00000373589 YWHAQP27348 245 aa16.2■□□□□ 0.18
HDAC8-209ENST00000373589 CCR1P32246 355 aa16.2■□□□□ 0.18
HDAC8-209ENST00000373589 GLUD2P49448 558 aa16.2■□□□□ 0.18
HDAC8-209ENST00000373589 PDIA2Q13087 525 aaKnown RBP16.2■□□□□ 0.18
HDAC8-209ENST00000373589 MGAT5BQ3V5L5 792 aa16.2■□□□□ 0.18
HDAC8-209ENST00000373589 MSS51Q4VC12 460 aa16.2■□□□□ 0.18
HDAC8-209ENST00000373589 TNFAIP8L3Q5GJ75 292 aa16.2■□□□□ 0.18
HDAC8-209ENST00000373589 FAM182AQ5T1J6 154 aa16.2■□□□□ 0.18
HDAC8-209ENST00000373589 HEATR6Q6AI08 1181 aaKnown RBP16.2■□□□□ 0.18
HDAC8-209ENST00000373589 MFSD5Q6N075 450 aa16.2■□□□□ 0.18
HDAC8-209ENST00000373589 GPR152Q8TDT2 470 aa16.2■□□□□ 0.18
HDAC8-209ENST00000373589 HTR3CQ8WXA8 447 aa16.2■□□□□ 0.18
HDAC8-209ENST00000373589 SERPINB11Q96P15 392 aa16.2■□□□□ 0.18
HDAC8-209ENST00000373589 BCCIPQ9P287 314 aaKnown RBP eCLIP16.2■□□□□ 0.18
HDAC8-209ENST00000373589 ZMYND8Q9ULU4 1186 aaPredicted RBP16.2■□□□□ 0.18
HDAC8-209ENST00000373589 NOVA2Q9UNW9 492 aaKnown RBP16.2■□□□□ 0.18
HDAC8-209ENST00000373589 NEU3Q9UQ49 428 aa16.2■□□□□ 0.18
HDAC8-209ENST00000373589 WDR27A2RRH5 827 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 KCNU1A8MYU2 1149 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 MSI1O43347 362 aaKnown RBP16.19■□□□□ 0.18
HDAC8-209ENST00000373589 DEFB103AP81534 67 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 DUSP4Q13115 394 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 AUHQ13825 339 aaKnown RBP16.19■□□□□ 0.18
HDAC8-209ENST00000373589 ARTNQ5T4W7 220 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 PDZD4Q76G19 769 aaPredicted RBP16.19■□□□□ 0.18
HDAC8-209ENST00000373589 ZBED8Q8IZ13 594 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 SEPT5Q99719 369 aaPredicted RBP16.19■□□□□ 0.18
HDAC8-209ENST00000373589 WDR83Q9BRX9 315 aaKnown RBP16.19■□□□□ 0.18
HDAC8-209ENST00000373589 KLC2Q9H0B6 622 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 PRDM12Q9H4Q4 367 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 CLIC5Q9NZA1 410 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.19■□□□□ 0.18
HDAC8-209ENST00000373589 NUDT5Q9UKK9 219 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 MYO16Q9Y6X6 1858 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 TLDC2A0PJX2 215 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 PPP1R12AO14974 1030 aaPredicted RBP16.19■□□□□ 0.18
HDAC8-209ENST00000373589 EFCAB14O75071 495 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 METTL18O95568 372 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 EPHB2P29323 1055 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 HOXC13P31276 330 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 WDR5P61964 334 aaKnown RBP16.19■□□□□ 0.18
HDAC8-209ENST00000373589 RPL10AP62906 217 aaKnown RBP16.19■□□□□ 0.18
HDAC8-209ENST00000373589 PSMD5Q16401 504 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 MANEALQ5VSG8 457 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 NECAB2Q7Z6G3 386 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 TMCO2Q7Z6W1 182 aaPredicted RBP16.19■□□□□ 0.18
HDAC8-209ENST00000373589 TP53INP2Q8IXH6 220 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 CCDC13Q8IYE1 715 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 PDIK1LQ8N165 341 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 SLC39A11Q8N1S5 342 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 NPWQ8N729 165 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 NETO2Q8NC67 525 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 FBXO32Q969P5 355 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 P2RY11Q96G91 374 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 SLC39A13Q96H72 371 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 SERPINB12Q96P63 405 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 FRMD8Q9BZ67 464 aaPredicted RBP16.19■□□□□ 0.18
HDAC8-209ENST00000373589 ETNK1Q9HBU6 452 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 TLR6Q9Y2C9 796 aa16.19■□□□□ 0.18
HDAC8-209ENST00000373589 ZNF638Q14966 1978 aaKnown RBP16.18■□□□□ 0.18
HDAC8-209ENST00000373589 A0A0A0MRY4 1105 aa16.18■□□□□ 0.18
HDAC8-209ENST00000373589 NCAM2O15394 837 aa16.18■□□□□ 0.18
HDAC8-209ENST00000373589 RGS16O15492 202 aaPredicted RBP16.18■□□□□ 0.18
HDAC8-209ENST00000373589 SHOX2O60902 331 aaPredicted RBP16.18■□□□□ 0.18
HDAC8-209ENST00000373589 PAGE1O75459 146 aa16.18■□□□□ 0.18
HDAC8-209ENST00000373589 BANF1O75531 89 aa16.18■□□□□ 0.18
HDAC8-209ENST00000373589 ZNF189O75820 626 aaPredicted RBP16.18■□□□□ 0.18
HDAC8-209ENST00000373589 AGTP01019 485 aa16.18■□□□□ 0.18
HDAC8-209ENST00000373589 SOD2P04179 222 aa16.18■□□□□ 0.18
HDAC8-209ENST00000373589 HTR7P34969 479 aa16.18■□□□□ 0.18
HDAC8-209ENST00000373589 SLCO1A2P46721 670 aa16.18■□□□□ 0.18
HDAC8-209ENST00000373589 PSEN1P49768 467 aa16.18■□□□□ 0.18
HDAC8-209ENST00000373589 MAGOHP61326 146 aaKnown RBP16.18■□□□□ 0.18
HDAC8-209ENST00000373589 TAF10Q12962 218 aa16.18■□□□□ 0.18
HDAC8-209ENST00000373589 STAT4Q14765 748 aa16.18■□□□□ 0.18
HDAC8-209ENST00000373589 LONRF1Q17RB8 773 aa16.18■□□□□ 0.18
HDAC8-209ENST00000373589 DNAJC21Q5F1R6 531 aaKnown RBP16.18■□□□□ 0.18
HDAC8-209ENST00000373589 PPP1R21Q6ZMI0 780 aa16.18■□□□□ 0.18
HDAC8-209ENST00000373589 CEP295NLQ96MC4 621 aa16.18■□□□□ 0.18
HDAC8-209ENST00000373589 SPATA13Q96N96 652 aa16.18■□□□□ 0.18
HDAC8-209ENST00000373589 ZNF558Q96NG5 402 aa16.18■□□□□ 0.18
HDAC8-209ENST00000373589 PRDM10Q9NQV6 1147 aa16.18■□□□□ 0.18
HDAC8-209ENST00000373589 PRDM5Q9NQX1 630 aaPredicted RBP16.18■□□□□ 0.18
HDAC8-209ENST00000373589 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.18■□□□□ 0.18
HDAC8-209ENST00000373589 NR2E3Q9Y5X4 410 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms