RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 DEFB118Q96PH6 123 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 DPP3Q9NY33 737 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 NDUFA13Q9P0J0 144 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 MYOCOSA0A1B0GUC4 107 aa11.52□□□□□ -0.56
RPRD1B-201ENST00000373433 ZNF189O75820 626 aaPredicted RBP11.52□□□□□ -0.56
RPRD1B-201ENST00000373433 RAG1P15918 1043 aa11.52□□□□□ -0.56
RPRD1B-201ENST00000373433 YWHAGP61981 247 aaKnown RBP eCLIP11.52□□□□□ -0.56
RPRD1B-201ENST00000373433 BST1Q10588 318 aa11.52□□□□□ -0.56
RPRD1B-201ENST00000373433 CUL2Q13617 745 aa11.52□□□□□ -0.56
RPRD1B-201ENST00000373433 ANKRD20A4Q4UJ75 823 aa11.52□□□□□ -0.56
RPRD1B-201ENST00000373433 MSS51Q4VC12 460 aa11.52□□□□□ -0.56
RPRD1B-201ENST00000373433 RALGPS1Q5JS13 557 aa11.52□□□□□ -0.56
RPRD1B-201ENST00000373433 TCHHL1Q5QJ38 904 aaPredicted RBP11.52□□□□□ -0.56
RPRD1B-201ENST00000373433 ZBTB41Q5SVQ8 909 aa11.52□□□□□ -0.56
RPRD1B-201ENST00000373433 MORN1Q5T089 497 aa11.52□□□□□ -0.56
RPRD1B-201ENST00000373433 IYDQ6PHW0 289 aa11.52□□□□□ -0.56
RPRD1B-201ENST00000373433 ADGRD1Q6QNK2 874 aa11.52□□□□□ -0.56
RPRD1B-201ENST00000373433 MFSD7Q6UXD7 560 aa11.52□□□□□ -0.56
RPRD1B-201ENST00000373433 SCN4BQ8IWT1 228 aa11.52□□□□□ -0.56
RPRD1B-201ENST00000373433 ARHGEF38Q9NXL2 777 aa11.52□□□□□ -0.56
RPRD1B-201ENST00000373433 FLRT1Q9NZU1 646 aa11.52□□□□□ -0.56
RPRD1B-201ENST00000373433 SAE1Q9UBE0 346 aaPredicted RBP11.52□□□□□ -0.56
RPRD1B-201ENST00000373433 SOX13Q9UN79 622 aa11.52□□□□□ -0.56
RPRD1B-201ENST00000373433 SIPA1L1O43166 1804 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 IQANK1A0A1B0GTG1 560 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 SMIM35A0A1B0GVV1 85 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 LACTBL1A8MY62 500 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 TGDSO95455 350 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 PMLP29590 882 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 FAAP100Q0VG06 881 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 ITGA7Q13683 1181 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 CHI3L2Q15782 390 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 NADK2Q4G0N4 442 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 FNBP1LQ5T0N5 605 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 FAM182AQ5T1J6 154 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 RNASEH2BQ5TBB1 312 aaKnown RBP11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 TMCO4Q5TGY1 634 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 ANKRD22Q5VYY1 191 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 METTL23Q86XA0 190 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 APOPT1Q96IL0 206 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 ZNF560Q96MR9 790 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 C16orf70Q9BSU1 422 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 PPCSQ9HAB8 311 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 GPAMQ9HCL2 828 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 SSU72Q9NP77 194 aaKnown RBP11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 PCSK1NQ9UHG2 260 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 FAF1Q9UNN5 650 aaPredicted RBP11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 PCDHB2Q9Y5E7 798 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 GOLGA8CPA6NN73 597 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 PSTPIP1O43586 416 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 ATP9BO43861 1147 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 RPL5P46777 297 aaKnown RBP11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 ORC1Q13415 861 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 TARBP2Q15633 366 aaKnown RBP11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 C1orf220Q5T0J3 134 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 ALLCQ8N6M5 410 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 OR5B17Q8NGF7 314 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 LZICQ8WZA0 190 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 CNBD2Q96M20 576 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 ACSS3Q9H6R3 686 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 USP29Q9HBJ7 922 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 PAIP2BQ9ULR5 123 aaKnown RBP11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 PLA2G4CQ9UP65 541 aa11.52□□□□□ -0.57
RPRD1B-201ENST00000373433 NDC80O14777 642 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 TCF4P15884 667 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 CCND3P30281 292 aaPredicted RBP11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 BASP1P80723 227 aaKnown RBP11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 TRIM32Q13049 653 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 DCTN2Q13561 401 aaKnown RBP11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 KRT81Q14533 505 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 HSP90AA5PQ58FG0 334 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 MAP3K21Q5TCX8 1036 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 DNAJC24Q6P3W2 148 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 FBXL19Q6PCT2 694 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 CCNYQ8ND76 341 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 HSPBAP1Q96EW2 488 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 TRIM11Q96F44 468 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 SIKE1Q9BRV8 207 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 SENP6Q9GZR1 1112 aaPredicted RBP11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 KCNK4Q9NYG8 393 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 DNAJB4Q9UDY4 337 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 CIDEBQ9UHD4 219 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 SHOC2Q9UQ13 582 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 LZTS1Q9Y250 596 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 TRPV2Q9Y5S1 764 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 MRPL42Q9Y6G3 142 aaKnown RBP11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 IGKV6D-21A0A0A0MT36 114 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 VILLO15195 856 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 CABYRO75952 493 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 PDGFRBP09619 1106 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 ITGA9Q13797 1035 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 DUS1LQ6P1R4 473 aaKnown RBP11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 LRRC8BQ6P9F7 803 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 PAOXQ6QHF9 649 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 ZCCHC23Q6ZST2 131 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 CRLF3Q8IUI8 442 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 EXD1Q8NHP7 514 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 PRPF18Q99633 342 aaKnown RBP11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 MRPL1Q9BYD6 325 aaKnown RBP11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 DTNAQ9Y4J8 743 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms