RNA–Protein interactions for RNA: ENST00000372826.6

PABPC1L-208, Transcript of poly(A) binding protein cytoplasmic 1 like, human

TSL 5

Gene PABPC1L, Length 854 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1L-208	ENST00000372826	DCTN4	Q9UJW0	460 aa		10.85	□□□□□ -0.67
PABPC1L-208	ENST00000372826	CDH7	Q9ULB5	785 aa		10.85	□□□□□ -0.67
PABPC1L-208	ENST00000372826	ARHGAP26	Q9UNA1	814 aa		10.85	□□□□□ -0.67
PABPC1L-208	ENST00000372826	HBS1L	Q9Y450	684 aa	Known RBP	10.85	□□□□□ -0.67
PABPC1L-208	ENST00000372826	USP34	Q70CQ2	3546 aa		10.85	□□□□□ -0.67
PABPC1L-208	ENST00000372826	SLC12A8	A0AV02	714 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	CCDC66	A2RUB6	948 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	GRID2IP	A4D2P6	1211 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	USP27X	A6NNY8	438 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	BUB1	O43683	1085 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	LRCH4	O75427	683 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	MOCS3	O95396	460 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	PRAMEF12	O95522	483 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	F9	P00740	461 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	MBL2	P11226	248 aa	Predicted RBP	10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	GBP1	P32455	592 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	AVPR1A	P37288	418 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	CXCR3	P49682	368 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	KPNA1	P52294	538 aa	Predicted RBP	10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	HDAC4	P56524	1084 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	ATP11A	P98196	1134 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	DEUP1	Q05D60	604 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	RING1	Q06587	406 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	NME3	Q13232	169 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	MESD	Q14696	234 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	CDO1	Q16878	200 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	MAP7D1	Q3KQU3	841 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	SH3PXD2A	Q5TCZ1	1133 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	BLOC1S3	Q6QNY0	202 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	KRT222	Q8N1A0	295 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	ARFGAP1	Q8N6T3	406 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	LRRC57	Q8N9N7	239 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	PLD4	Q96BZ4	506 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	SLC39A13	Q96H72	371 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	FCRL2	Q96LA5	508 aa	Predicted RBP	10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	MYADM	Q96S97	322 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	CYP2S1	Q96SQ9	504 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	NCAPG	Q9BPX3	1015 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	OCSTAMP	Q9BR26	566 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	SLITRK6	Q9H5Y7	841 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	TRPV4	Q9HBA0	871 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	PIGV	Q9NUD9	493 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	TRMT1	Q9NXH9	659 aa	Known RBP	10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	GUCA1B	Q9UMX6	200 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	TLR6	Q9Y2C9	796 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	CPQ	Q9Y646	472 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	CAPN6	Q9Y6Q1	641 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	C5orf42	Q9H799	3197 aa		10.84	□□□□□ -0.67
PABPC1L-208	ENST00000372826	TMEM110-MUSTN1	A8MSY1	372 aa		10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	RNF8	O76064	485 aa		10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	PCK1	P35558	622 aa		10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	SLC1A1	P43005	524 aa		10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	ATXN1	P54253	815 aa	Known RBP	10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	NAP1L1	P55209	391 aa	Known RBP	10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	TBX4	P57082	545 aa		10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	COG7	P83436	770 aa		10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	ZXDB	P98169	803 aa		10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	USP4	Q13107	963 aa		10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	PPP2R5D	Q14738	602 aa		10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	SMAD2	Q15796	467 aa	Known RBP	10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	RAB6C	Q53S08	254 aa		10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	FAM78A	Q5JUQ0	283 aa		10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	SLFN11	Q7Z7L1	901 aa		10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	DDX42	Q86XP3	938 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	CPNE8	Q86YQ8	564 aa		10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	SMARCD2	Q92925	531 aa		10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	USP13	Q92995	863 aa	Predicted RBP	10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	USB1	Q9BQ65	265 aa	Known RBP	10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	RAB6C	Q9H0N0	254 aa		10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	SMG9	Q9H0W8	520 aa	Known RBP	10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	KIF9	Q9HAQ2	790 aa		10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	TDP1	Q9NUW8	608 aa		10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	SMPD4	Q9NXE4	827 aa		10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	EPS15L1	Q9UBC2	864 aa		10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	ANAPC1	Q9H1A4	1944 aa		10.83	□□□□□ -0.68
PABPC1L-208	ENST00000372826	DENND4C	Q5VZ89	1909 aa		10.82	□□□□□ -0.68
PABPC1L-208	ENST00000372826	SYNJ2BP-COX16	A0A087WUM0	186 aa		10.82	□□□□□ -0.68
PABPC1L-208	ENST00000372826	KCNU1	A8MYU2	1149 aa		10.82	□□□□□ -0.68
PABPC1L-208	ENST00000372826	LEFTY2	O00292	366 aa		10.82	□□□□□ -0.68
PABPC1L-208	ENST00000372826	GREM1	O60565	184 aa		10.82	□□□□□ -0.68
PABPC1L-208	ENST00000372826	PALM	O75781	387 aa		10.82	□□□□□ -0.68
PABPC1L-208	ENST00000372826	STC2	O76061	302 aa		10.82	□□□□□ -0.68
PABPC1L-208	ENST00000372826	SLC2A3	P11169	496 aa		10.82	□□□□□ -0.68
PABPC1L-208	ENST00000372826	LAMP2	P13473	410 aa		10.82	□□□□□ -0.68
PABPC1L-208	ENST00000372826	COMT	P21964	271 aa		10.82	□□□□□ -0.68
PABPC1L-208	ENST00000372826	FCAR	P24071	287 aa		10.82	□□□□□ -0.68
PABPC1L-208	ENST00000372826	MIP	P30301	263 aa		10.82	□□□□□ -0.68
PABPC1L-208	ENST00000372826	CCR1	P32246	355 aa		10.82	□□□□□ -0.68
PABPC1L-208	ENST00000372826	GBP2	P32456	591 aa	Predicted RBP	10.82	□□□□□ -0.68
PABPC1L-208	ENST00000372826	SEC13	P55735	322 aa		10.82	□□□□□ -0.68
PABPC1L-208	ENST00000372826	SLC25A11	Q02978	314 aa	Known RBP	10.82	□□□□□ -0.68
PABPC1L-208	ENST00000372826	ZP2	Q05996	745 aa		10.82	□□□□□ -0.68
PABPC1L-208	ENST00000372826	ZNF77	Q15935	545 aa		10.82	□□□□□ -0.68
PABPC1L-208	ENST00000372826	ZC3H12A	Q5D1E8	599 aa	Known RBP	10.82	□□□□□ -0.68
PABPC1L-208	ENST00000372826	BRMS1L	Q5PSV4	323 aa		10.82	□□□□□ -0.68
PABPC1L-208	ENST00000372826	DAB2IP	Q5VWQ8	1189 aa		10.82	□□□□□ -0.68
PABPC1L-208	ENST00000372826	NUGGC	Q68CJ6	796 aa		10.82	□□□□□ -0.68

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