RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 ZNF560Q96MR9 790 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 TIPINQ9BVW5 301 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 ACAT2Q9BWD1 397 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 TDRD1Q9BXT4 1180 aaKnown RBP15.61■□□□□ 0.09
COL5A1-201ENST00000371817 ALDH8A1Q9H2A2 487 aaPredicted RBP15.61■□□□□ 0.09
COL5A1-201ENST00000371817 UHRF1BP1LA0JNW5 1464 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 CYP4F2P78329 520 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 CYP4F3Q08477 520 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 NCOA4Q13772 614 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 FBXO25Q8TCJ0 367 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 FAM49AQ9H0Q0 323 aaPredicted RBP15.61■□□□□ 0.09
COL5A1-201ENST00000371817 TFR2Q9UP52 801 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 XDHP47989 1333 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 NOTOA8MTQ0 251 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 AGRPO00253 132 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 S100GP29377 79 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 USP46P62068 366 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 C6orf183Q5T699 404 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 RNF148Q8N7C7 305 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 CDK8P49336 464 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 RBM20Q5T481 1227 aaKnown RBP15.61■□□□□ 0.09
COL5A1-201ENST00000371817 PYHIN1Q6K0P9 492 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 HMBOX1Q6NT76 420 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 RMDN3Q96TC7 470 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 XKR8Q9H6D3 395 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 ARID1BQ8NFD5 2236 aaPredicted RBP15.61■□□□□ 0.09
COL5A1-201ENST00000371817 IDH2P48735 452 aaKnown RBP15.61■□□□□ 0.09
COL5A1-201ENST00000371817 ENPEPQ07075 957 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 ANKRD26P1Q6NSI1 321 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 CXXC5Q7LFL8 322 aaKnown RBP15.61■□□□□ 0.09
COL5A1-201ENST00000371817 FNDC5Q8NAU1 212 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 APOPT1Q96IL0 206 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 ERGIC2Q96RQ1 377 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 PP2D1A8MPX8 630 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 ETS1P14921 441 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 RASA1P20936 1047 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 TNK2Q07912 1038 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 WDR72Q3MJ13 1102 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 EEPD1Q7L9B9 569 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 FAM126BQ8IXS8 530 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 TRMT2AQ8IZ69 625 aaKnown RBP15.61■□□□□ 0.09
COL5A1-201ENST00000371817 MUC3BQ9H195 1237 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 MGAT4AQ9UM21 535 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 AAR2Q9Y312 384 aaKnown RBP15.61■□□□□ 0.09
COL5A1-201ENST00000371817 MSANTD1Q6ZTZ1 278 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 CNKSR1Q969H4 720 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 RAB21Q9UL25 225 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 THRBP10828 461 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 FOSL1P15407 271 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 ZNF614Q8N883 585 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 FRMD6Q96NE9 622 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 COQ6Q9Y2Z9 468 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 CSPG5O95196 566 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 IL31Q6EBC2 164 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 MND1Q9BWT6 205 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 MYL9P24844 172 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 SNRNP35Q16560 246 aaKnown RBP15.6■□□□□ 0.09
COL5A1-201ENST00000371817 ARHGAP27Q6ZUM4 889 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 MSL3Q8N5Y2 521 aaKnown RBP15.6■□□□□ 0.09
COL5A1-201ENST00000371817 WDR41Q9HAD4 459 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 OGDHLQ9ULD0 1010 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 CASZ1Q86V15 1759 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 TRMUO75648 421 aaKnown RBP15.6■□□□□ 0.09
COL5A1-201ENST00000371817 CCNE2O96020 404 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 TUFMP49411 452 aaKnown RBP15.6■□□□□ 0.09
COL5A1-201ENST00000371817 CRTC3Q6UUV7 619 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 GPAMQ9HCL2 828 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 IKZF3Q9UKT9 509 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 GLI1P08151 1106 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 GRIA3P42263 894 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 HIRAP54198 1017 aaPredicted RBP15.6■□□□□ 0.09
COL5A1-201ENST00000371817 KCNJ2P63252 427 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 CDH18Q13634 790 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 PLCL1Q15111 1095 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 RNF43Q68DV7 783 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 FAM131AQ6UXB0 335 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 DEPDC4Q8N2C3 294 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 PTCD3Q96EY7 689 aaKnown RBP15.6■□□□□ 0.09
COL5A1-201ENST00000371817 INVSQ9Y283 1065 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 SNX9Q9Y5X1 595 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 PLB1Q6P1J6 1458 aa15.6■□□□□ 0.09
COL5A1-201ENST00000371817 MYL4P12829 197 aa15.59■□□□□ 0.09
COL5A1-201ENST00000371817 PDIA5Q14554 519 aa15.59■□□□□ 0.09
COL5A1-201ENST00000371817 PLA2G4FQ68DD2 849 aa15.59■□□□□ 0.09
COL5A1-201ENST00000371817 AADATQ8N5Z0 425 aa15.59■□□□□ 0.09
COL5A1-201ENST00000371817 LRRC40Q9H9A6 602 aa15.59■□□□□ 0.09
COL5A1-201ENST00000371817 ZNF112Q9UJU3 913 aa15.59■□□□□ 0.09
COL5A1-201ENST00000371817 GPD1P21695 349 aa15.59■□□□□ 0.09
COL5A1-201ENST00000371817 HAUS6Q7Z4H7 955 aa15.59■□□□□ 0.09
COL5A1-201ENST00000371817 CHPFQ8IZ52 775 aa15.59■□□□□ 0.09
COL5A1-201ENST00000371817 ABCB11O95342 1321 aa15.59■□□□□ 0.09
COL5A1-201ENST00000371817 ERVV-2B6SEH9 535 aa15.59■□□□□ 0.09
COL5A1-201ENST00000371817 SLC26A4O43511 780 aa15.59■□□□□ 0.09
COL5A1-201ENST00000371817 TCEA3O75764 348 aa15.59■□□□□ 0.09
COL5A1-201ENST00000371817 GRAP2O75791 330 aa15.59■□□□□ 0.09
COL5A1-201ENST00000371817 NR3C2P08235 984 aa15.59■□□□□ 0.09
COL5A1-201ENST00000371817 MSL3P1P0C860 447 aa15.59■□□□□ 0.09
COL5A1-201ENST00000371817 GPR1P46091 355 aa15.59■□□□□ 0.09
COL5A1-201ENST00000371817 PHF12Q96QT6 1004 aa15.59■□□□□ 0.09
COL5A1-201ENST00000371817 RACGAP1Q9H0H5 632 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms