RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 KCNE1P15382 129 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 ATP2A2P16615 1042 aaKnown RBP3.78□□□□□ -1.8
MCF2-202ENST00000370573 TRIM21P19474 475 aaKnown RBP3.78□□□□□ -1.8
MCF2-202ENST00000370573 CCND1P24385 295 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 IGFBP6P24592 240 aaPredicted RBP3.78□□□□□ -1.8
MCF2-202ENST00000370573 FLT3P36888 993 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 KCNJ6P48051 423 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 AP3M2P53677 418 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 JAM2P57087 298 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 MYL6P60660 151 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 ZBED6P86452 979 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 TFAMQ00059 246 aaKnown RBP3.78□□□□□ -1.8
MCF2-202ENST00000370573 MAP4K2Q12851 820 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 TRIM14Q14142 442 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 PPP2R5DQ14738 602 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 HS1BP3Q53T59 392 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 PDXDC1Q6P996 788 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 RRAGAQ7L523 313 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 MAMDC2Q7Z304 686 aaPredicted RBP3.78□□□□□ -1.8
MCF2-202ENST00000370573 USP37Q86T82 979 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 ECHDC2Q86YB7 292 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 CD302Q8IX05 232 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 KREMEN2Q8NCW0 462 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 DBF4BQ8NFT6 615 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 OR8K1Q8NGG5 319 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 AHCYL2Q96HN2 611 aaKnown RBP3.78□□□□□ -1.8
MCF2-202ENST00000370573 PANX2Q96RD6 677 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 CHP1Q99653 195 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 IFIH1Q9BYX4 1025 aaKnown RBP3.78□□□□□ -1.8
MCF2-202ENST00000370573 TRIM6Q9C030 488 aaPredicted RBP3.78□□□□□ -1.8
MCF2-202ENST00000370573 XYLT2Q9H1B5 865 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 NKX2-4Q9H2Z4 354 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 NOL6Q9H6R4 1146 aaKnown RBP3.78□□□□□ -1.8
MCF2-202ENST00000370573 PLEKHA5Q9HAU0 1116 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 UBE2TQ9NPD8 197 aaPredicted RBP3.78□□□□□ -1.8
MCF2-202ENST00000370573 RGS18Q9NS28 235 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 DPP3Q9NY33 737 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 CEP72Q9P209 647 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 PYCARDQ9ULZ3 195 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 GPR55Q9Y2T6 319 aaPredicted RBP3.78□□□□□ -1.8
MCF2-202ENST00000370573 NUB1Q9Y5A7 615 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 CITO14578 2027 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 ARL5CA6NH57 179 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 LRRC53A6NM62 1247 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 FOXN3O00409 490 aaPredicted RBP3.78□□□□□ -1.8
MCF2-202ENST00000370573 PPEF2O14830 753 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 KIAA0355O15063 1070 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 H2AFYO75367 372 aaKnown RBP3.78□□□□□ -1.8
MCF2-202ENST00000370573 TNNC2P02585 160 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 CXCL10P02778 98 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 CKMP06732 381 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 PLEKP08567 350 aaPredicted RBP3.78□□□□□ -1.8
MCF2-202ENST00000370573 SNRPB2P08579 225 aaKnown RBP3.78□□□□□ -1.8
MCF2-202ENST00000370573 CLTBP09497 229 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 SKILP12757 684 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 HNRNPH3P31942 346 aaKnown RBP3.78□□□□□ -1.8
MCF2-202ENST00000370573 ECI1P42126 302 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 RECQLP46063 649 aaPredicted RBP3.78□□□□□ -1.8
MCF2-202ENST00000370573 GUCY1A3Q02108 690 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 CETN1Q12798 172 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 BIRC3Q13489 604 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 MTF1Q14872 753 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 DRAP1Q14919 205 aaPredicted RBP3.78□□□□□ -1.8
MCF2-202ENST00000370573 TMEM132DQ14C87 1099 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 NAB2Q15742 525 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 GLRA4Q5JXX5 417 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 PGM2L1Q6PCE3 622 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 IRF2BP2Q7Z5L9 587 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 CNGA4Q8IV77 575 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 C7orf61Q8IZ16 206 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 CCDC150Q8NCX0 1101 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 PPP1R10Q96QC0 940 aaKnown RBP3.78□□□□□ -1.8
MCF2-202ENST00000370573 GAD1Q99259 594 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 KRTAP9-9Q9BYP9 154 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 STK33Q9BYT3 514 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 FOXP3Q9BZS1 431 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 PRDM14Q9GZV8 571 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 MS4A5Q9H3V2 200 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 NSUN3Q9H649 340 aaKnown RBP3.78□□□□□ -1.8
MCF2-202ENST00000370573 ABHD10Q9NUJ1 306 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 TUBGCP4Q9UGJ1 667 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 FBXL5Q9UKA1 691 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 LZTS1Q9Y250 596 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 DERAQ9Y315 318 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 C2CD2Q9Y426 696 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 OFD1O75665 1012 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 ASS1P00966 412 aaKnown RBP3.77□□□□□ -1.81
MCF2-202ENST00000370573 TIMP1P01033 207 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 CALCAP01258 141 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 ITGB3P05106 788 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 TMEM191BP0C7N4 346 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 CAPN2P17655 700 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 ACO1P21399 889 aaKnown RBP3.77□□□□□ -1.81
MCF2-202ENST00000370573 MLH1P40692 756 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 PIK3CAP42336 1068 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 HALP42357 657 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 MESP2Q0VG99 397 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 GTF2H3Q13889 308 aa3.77□□□□□ -1.81
MCF2-202ENST00000370573 ZNF267Q14586 743 aaPredicted RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms