RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 GPR25O00155 361 aa16.63■□□□□ 0.25
CHD1L-203ENST00000369259 STAM2O75886 525 aa16.63■□□□□ 0.25
CHD1L-203ENST00000369259 GARTP22102 1010 aa16.63■□□□□ 0.25
CHD1L-203ENST00000369259 CDH3P22223 829 aa16.63■□□□□ 0.25
CHD1L-203ENST00000369259 ME2P23368 584 aa16.63■□□□□ 0.25
CHD1L-203ENST00000369259 PIK3R1P27986 724 aa16.63■□□□□ 0.25
CHD1L-203ENST00000369259 CDH15P55291 814 aa16.63■□□□□ 0.25
CHD1L-203ENST00000369259 PKNOX1P55347 436 aa16.63■□□□□ 0.25
CHD1L-203ENST00000369259 SNX32Q86XE0 403 aa16.63■□□□□ 0.25
CHD1L-203ENST00000369259 CHPT1Q8WUD6 406 aa16.63■□□□□ 0.25
CHD1L-203ENST00000369259 DEPDC1BQ8WUY9 529 aa16.63■□□□□ 0.25
CHD1L-203ENST00000369259 LRRC39Q96DD0 335 aa16.63■□□□□ 0.25
CHD1L-203ENST00000369259 FERMT1Q9BQL6 677 aa16.63■□□□□ 0.25
CHD1L-203ENST00000369259 EIF2AQ9BY44 585 aaKnown RBP16.63■□□□□ 0.25
CHD1L-203ENST00000369259 ARMC7Q9H6L4 198 aa16.63■□□□□ 0.25
CHD1L-203ENST00000369259 ANLNQ9NQW6 1124 aa16.63■□□□□ 0.25
CHD1L-203ENST00000369259 PAK5Q9P286 719 aa16.63■□□□□ 0.25
CHD1L-203ENST00000369259 CNTNAP2Q9UHC6 1331 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 CFLARO15519 480 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 CD1EP15812 388 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 TBXAS1P24557 533 aaPredicted RBP16.62■□□□□ 0.25
CHD1L-203ENST00000369259 NUMBP49757 651 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 CTBSQ01459 385 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 IKBKEQ14164 716 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 SLC9B1Q4ZJI4 515 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 DCAF6Q58WW2 860 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 NANOGP8Q6NSW7 305 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 CDC42EP5Q6NZY7 148 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 TRMT1LQ7Z2T5 733 aaKnown RBP16.62■□□□□ 0.25
CHD1L-203ENST00000369259 TRIM50Q86XT4 487 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 TMEM35BQ8NCS4 154 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 TBC1D15Q8TC07 691 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 ATP2A3Q93084 1043 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 SNX27Q96L92 541 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 HEPHQ9BQS7 1158 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 TRNAU1APQ9NX07 287 aaKnown RBP16.62■□□□□ 0.25
CHD1L-203ENST00000369259 SUN2Q9UH99 717 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 CDY2AQ9Y6F7 541 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 CDY1Q9Y6F8 540 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 STRCP1A6NGW2 1772 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 HNRNPDLO14979 420 aaKnown RBP16.62■□□□□ 0.25
CHD1L-203ENST00000369259 RALBP11234 206 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 CCDC130P13994 396 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 GLDCP23378 1020 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 RFC1P35251 1148 aaPredicted RBP16.62■□□□□ 0.25
CHD1L-203ENST00000369259 ATXN3P54252 364 aaPredicted RBP16.62■□□□□ 0.25
CHD1L-203ENST00000369259 NLRP11P59045 1033 aaKnown RBP16.62■□□□□ 0.25
CHD1L-203ENST00000369259 NFIAQ12857 509 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 FAM182AQ5T1J6 154 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 CYP4A22Q5TCH4 519 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 OGFOD2Q6N063 350 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 C16orf87Q6PH81 154 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 NPNTQ6UXI9 565 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 ZFPM1Q8IX07 1006 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 FIBCD1Q8N539 461 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 CASP10Q92851 521 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 KCNN1Q92952 543 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 USP13Q92995 863 aaPredicted RBP16.62■□□□□ 0.25
CHD1L-203ENST00000369259 TCHPQ9BT92 498 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 TUBA8Q9NY65 449 aaPredicted RBP16.62■□□□□ 0.25
CHD1L-203ENST00000369259 DCDC2Q9UHG0 476 aa16.62■□□□□ 0.25
CHD1L-203ENST00000369259 CLASP2O75122 1294 aaKnown RBP16.61■□□□□ 0.25
CHD1L-203ENST00000369259 INHBBP09529 407 aa16.61■□□□□ 0.25
CHD1L-203ENST00000369259 CNTN2Q02246 1040 aa16.61■□□□□ 0.25
CHD1L-203ENST00000369259 KCNC4Q03721 635 aa16.61■□□□□ 0.25
CHD1L-203ENST00000369259 TRPC3Q13507 836 aa16.61■□□□□ 0.25
CHD1L-203ENST00000369259 PDE1CQ14123 709 aaPredicted RBP16.61■□□□□ 0.25
CHD1L-203ENST00000369259 NOMO1Q15155 1222 aa16.61■□□□□ 0.25
CHD1L-203ENST00000369259 PPP6R3Q5H9R7 873 aaPredicted RBP16.61■□□□□ 0.25
CHD1L-203ENST00000369259 PPM1LQ5SGD2 360 aa16.61■□□□□ 0.25
CHD1L-203ENST00000369259 FAXCQ5TGI0 409 aa16.61■□□□□ 0.25
CHD1L-203ENST00000369259 PGAM4Q8N0Y7 254 aa16.61■□□□□ 0.25
CHD1L-203ENST00000369259 RNF148Q8N7C7 305 aa16.61■□□□□ 0.25
CHD1L-203ENST00000369259 RP9Q8TA86 221 aaKnown RBP16.61■□□□□ 0.25
CHD1L-203ENST00000369259 SLC4A5Q9BY07 1137 aa16.61■□□□□ 0.25
CHD1L-203ENST00000369259 CDH19Q9H159 772 aa16.61■□□□□ 0.25
CHD1L-203ENST00000369259 TSC22D4Q9Y3Q8 395 aa16.61■□□□□ 0.25
CHD1L-203ENST00000369259 GPC6Q9Y625 555 aaPredicted RBP16.61■□□□□ 0.25
CHD1L-203ENST00000369259 A0A087WXM4 84 aa16.6■□□□□ 0.25
CHD1L-203ENST00000369259 CCDC162PA2VCL2 907 aa16.6■□□□□ 0.25
CHD1L-203ENST00000369259 H7C0C1 242 aa16.6■□□□□ 0.25
CHD1L-203ENST00000369259 ACOT8O14734 319 aa16.6■□□□□ 0.25
CHD1L-203ENST00000369259 DHX15O43143 795 aaKnown RBP16.6■□□□□ 0.25
CHD1L-203ENST00000369259 ATE1O95260 518 aa16.6■□□□□ 0.25
CHD1L-203ENST00000369259 ITGB5P18084 799 aa16.6■□□□□ 0.25
CHD1L-203ENST00000369259 ATP5OP48047 213 aa16.6■□□□□ 0.25
CHD1L-203ENST00000369259 ZNF132P52740 706 aa16.6■□□□□ 0.25
CHD1L-203ENST00000369259 SLC10A2Q12908 348 aaPredicted RBP16.6■□□□□ 0.25
CHD1L-203ENST00000369259 XKR9Q5GH70 373 aa16.6■□□□□ 0.25
CHD1L-203ENST00000369259 IL23RQ5VWK5 629 aa16.6■□□□□ 0.25
CHD1L-203ENST00000369259 TMEM179Q6ZVK1 233 aa16.6■□□□□ 0.25
CHD1L-203ENST00000369259 ZNF341Q9BYN7 854 aa16.6■□□□□ 0.25
CHD1L-203ENST00000369259 TRPC7Q9HCX4 862 aa16.6■□□□□ 0.25
CHD1L-203ENST00000369259 KCNH7Q9NS40 1196 aa16.6■□□□□ 0.25
CHD1L-203ENST00000369259 COPG2Q9UBF2 871 aa16.6■□□□□ 0.25
CHD1L-203ENST00000369259 CDC14AQ9UNH5 594 aa16.6■□□□□ 0.25
CHD1L-203ENST00000369259 NUB1Q9Y5A7 615 aa16.6■□□□□ 0.25
CHD1L-203ENST00000369259 TRIM64CA6NLI5 447 aa16.6■□□□□ 0.25
CHD1L-203ENST00000369259 EXTL3O43909 919 aa16.6■□□□□ 0.25
CHD1L-203ENST00000369259 ESRRBO95718 433 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms