RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 FMNL3Q8IVF7 1028 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 UBA3Q8TBC4 463 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 RNF139Q8WU17 664 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 EDEM1Q92611 657 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 FAXDC2Q96IV6 333 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 GDPD2Q9HCC8 539 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 OLA1Q9NTK5 396 aaKnown RBP10.81□□□□□ -0.68
CLRN3-201ENST00000368671 HESX1Q9UBX0 185 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 SFMBT1Q9UHJ3 866 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 PI4KAP42356 2102 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 CKAP5Q14008 2032 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 CACNA1BQ00975 2339 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 MAP1BP46821 2468 aaKnown RBP10.8□□□□□ -0.68
CLRN3-201ENST00000368671 A0A1W2PQ27 194 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 A0A1W2PQ64 194 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 METTL12A8MUP2 240 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 XPO1O14980 1071 aaKnown RBP10.8□□□□□ -0.68
CLRN3-201ENST00000368671 GJB3O75712 270 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 ADH1BP00325 375 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 HOXD9P28356 352 aaPredicted RBP10.8□□□□□ -0.68
CLRN3-201ENST00000368671 OXTRP30559 389 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 HARS2P49590 506 aaKnown RBP10.8□□□□□ -0.68
CLRN3-201ENST00000368671 ADIGQ0VDE8 80 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 BST2Q10589 180 aaKnown RBP10.8□□□□□ -0.68
CLRN3-201ENST00000368671 LRMPQ12912 555 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 PNOCQ13519 176 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 CUL2Q13617 745 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 E2F5Q15329 346 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 TRIP4Q15650 581 aaPredicted RBP10.8□□□□□ -0.68
CLRN3-201ENST00000368671 ZNF423Q2M1K9 1284 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 FNDC3BQ53EP0 1204 aaKnown RBP10.8□□□□□ -0.68
CLRN3-201ENST00000368671 SGO2Q562F6 1265 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 PM20D1Q6GTS8 502 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 CHST9Q7L1S5 443 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 BHLHA9Q7RTU4 235 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 FAM217AQ8IXS0 508 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 SIX6OS1Q8N1H7 587 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 ZNF366Q8N895 744 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 PNPLA1Q8N8W4 532 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 RBBP8NLQ8NC74 664 aaPredicted RBP10.8□□□□□ -0.68
CLRN3-201ENST00000368671 CADM4Q8NFZ8 388 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 CYB5D2Q8WUJ1 264 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 DNASE2BQ8WZ79 361 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 SNX19Q92543 992 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 THAP11Q96EK4 314 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 IPO9Q96P70 1041 aaKnown RBP10.8□□□□□ -0.68
CLRN3-201ENST00000368671 TSG101Q99816 390 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 NUP58Q9BVL2 599 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 SLC2A11Q9BYW1 496 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 ZDHHC5Q9C0B5 715 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 SCAND2PQ9GZW5 306 aaPredicted RBP10.8□□□□□ -0.68
CLRN3-201ENST00000368671 IL21RQ9HBE5 538 aa10.8□□□□□ -0.68
CLRN3-201ENST00000368671 EIF2B4Q9UI10 523 aaKnown RBP10.8□□□□□ -0.68
CLRN3-201ENST00000368671 ASCC3Q8N3C0 2202 aaKnown RBP10.8□□□□□ -0.68
CLRN3-201ENST00000368671 YJEFN3A6XGL0 299 aa10.79□□□□□ -0.68
CLRN3-201ENST00000368671 E7ENQ6 273 aa10.79□□□□□ -0.68
CLRN3-201ENST00000368671 PIK3R2O00459 728 aa10.79□□□□□ -0.68
CLRN3-201ENST00000368671 BCAT2O15382 392 aaPredicted RBP10.79□□□□□ -0.68
CLRN3-201ENST00000368671 MSI1O43347 362 aaKnown RBP10.79□□□□□ -0.68
CLRN3-201ENST00000368671 FTH1P19P0C7X4 201 aa10.79□□□□□ -0.68
CLRN3-201ENST00000368671 LCP1P13796 627 aa10.79□□□□□ -0.68
CLRN3-201ENST00000368671 PRCPP42785 496 aa10.79□□□□□ -0.68
CLRN3-201ENST00000368671 MCCD1P59942 119 aaPredicted RBP10.79□□□□□ -0.68
CLRN3-201ENST00000368671 YWHAEP62258 255 aaKnown RBP10.79□□□□□ -0.68
CLRN3-201ENST00000368671 BSPRYQ5W0U4 402 aa10.79□□□□□ -0.68
CLRN3-201ENST00000368671 RAB44Q7Z6P3 723 aaPredicted RBP10.79□□□□□ -0.68
CLRN3-201ENST00000368671 OR2T3Q8NH03 318 aa10.79□□□□□ -0.68
CLRN3-201ENST00000368671 SETD7Q8WTS6 366 aaKnown RBP10.79□□□□□ -0.68
CLRN3-201ENST00000368671 CCDC34Q96HJ3 373 aa10.79□□□□□ -0.68
CLRN3-201ENST00000368671 LHX5Q9H2C1 402 aa10.79□□□□□ -0.68
CLRN3-201ENST00000368671 GAREM1Q9H706 876 aa10.79□□□□□ -0.68
CLRN3-201ENST00000368671 ABCB8Q9NUT2 735 aa10.79□□□□□ -0.68
CLRN3-201ENST00000368671 RMND1Q9NWS8 449 aa10.79□□□□□ -0.68
CLRN3-201ENST00000368671 HBS1LQ9Y450 684 aaKnown RBP10.79□□□□□ -0.68
CLRN3-201ENST00000368671 ATP6V1DQ9Y5K8 247 aa10.79□□□□□ -0.68
CLRN3-201ENST00000368671 ZFHX4Q86UP3 3567 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 TRIM49BA6NDI0 452 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 SLC16A3O15427 465 aaKnown RBP10.78□□□□□ -0.68
CLRN3-201ENST00000368671 TIMM44O43615 452 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 CER1O95813 267 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 IGLV3-19P01714 112 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 SETSIPP0DME0 302 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 VDRP11473 427 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 HLA-FP30511 346 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 MATKP42679 507 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 RGS7P49802 495 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 SGSHP51688 502 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 PMS1P54277 932 aaKnown RBP10.78□□□□□ -0.68
CLRN3-201ENST00000368671 DAOAP59103 153 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 BNC1Q01954 994 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 ZNF658Q5TYW1 1059 aaPredicted RBP10.78□□□□□ -0.68
CLRN3-201ENST00000368671 ANKRD40Q6AI12 368 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 AHI1Q8N157 1196 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 WFIKKN2Q8TEU8 576 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 TMA16Q96EY4 203 aaKnown RBP10.78□□□□□ -0.68
CLRN3-201ENST00000368671 TM7SF3Q9NS93 570 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 ABCC13Q9NSE7 274 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 GGA2Q9UJY4 613 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 PCOLCE2Q9UKZ9 415 aa10.78□□□□□ -0.68
CLRN3-201ENST00000368671 PLA2G4CQ9UP65 541 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms