RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 LRRC31Q6UY01 552 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 ADAT2Q7Z6V5 191 aaKnown RBP12.73□□□□□ -0.37
TUBE1-202ENST00000368662 DDX42Q86XP3 938 aaKnown RBP eCLIP12.73□□□□□ -0.37
TUBE1-202ENST00000368662 SIK2Q9H0K1 926 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 TTYH1Q9H313 450 aaPredicted RBP12.73□□□□□ -0.37
TUBE1-202ENST00000368662 TASP1Q9H6P5 420 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 FGF10O15520 208 aaPredicted RBP12.73□□□□□ -0.37
TUBE1-202ENST00000368662 PHF2O75151 1096 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 HMBSP08397 361 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 CHRNA3P32297 505 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 GTF2F1P35269 517 aaKnown RBP eCLIP12.73□□□□□ -0.37
TUBE1-202ENST00000368662 KCNQ1P51787 676 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 RBM10P98175 930 aaKnown RBP12.73□□□□□ -0.37
TUBE1-202ENST00000368662 LLGL1Q15334 1064 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 CYP1B1Q16678 543 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 GPR158Q5T848 1215 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 TMC5Q6UXY8 1006 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 BZW1Q7L1Q6 419 aaKnown RBP12.73□□□□□ -0.37
TUBE1-202ENST00000368662 MMGT1Q8N4V1 131 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 C12orf50Q8NA57 414 aaPredicted RBP12.73□□□□□ -0.37
TUBE1-202ENST00000368662 PCDH19Q8TAB3 1148 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 CYP2S1Q96SQ9 504 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 DDX50Q9BQ39 737 aaKnown RBP12.73□□□□□ -0.37
TUBE1-202ENST00000368662 HERPUD2Q9BSE4 406 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 DONSONQ9NYP3 566 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 ZNF510Q9Y2H8 683 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 MRPS23Q9Y3D9 190 aaKnown RBP12.73□□□□□ -0.37
TUBE1-202ENST00000368662 CPQQ9Y646 472 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 HS3ST4Q9Y661 456 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 OBSL1O75147 1896 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 TCRBV7S2A1N4TA0A589 114 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 STC2O76061 302 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 LRIG2O94898 1065 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 GLP2RO95838 553 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 HOXC13P31276 330 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 NR2C2P49116 596 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 FNTAP49354 379 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 DYNLT1P63172 113 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 C2orf54Q08AI8 447 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 ADAM15Q13444 863 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 SIX1Q15475 284 aaPredicted RBP12.72□□□□□ -0.37
TUBE1-202ENST00000368662 TEAD2Q15562 447 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 CCNG2Q16589 344 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 MS4A13Q5J8X5 152 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 PRPF38BQ5VTL8 546 aaKnown RBP12.72□□□□□ -0.37
TUBE1-202ENST00000368662 ANKRD54Q6NXT1 300 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 GPR149Q86SP6 731 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 CMTM8Q8IZV2 173 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 C12orf76Q8N812 135 aaPredicted RBP12.72□□□□□ -0.37
TUBE1-202ENST00000368662 PRELID2Q8N945 189 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 P3H4Q92791 437 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 TBC1D31Q96DN5 1066 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 ZFRQ96KR1 1074 aaKnown RBP12.72□□□□□ -0.37
TUBE1-202ENST00000368662 SLC46A2Q9BY10 475 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 MAGEB5Q9BZ81 275 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 SLITRK6Q9H5Y7 841 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 LRRC19Q9H756 370 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 CATSPERBQ9H7T0 1116 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 ARHGEF4Q9NR80 690 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 PPARGC1AQ9UBK2 798 aaKnown RBP12.72□□□□□ -0.37
TUBE1-202ENST00000368662 FEZ2Q9UHY8 353 aaPredicted RBP12.72□□□□□ -0.37
TUBE1-202ENST00000368662 LSM7Q9UK45 103 aaKnown RBP12.72□□□□□ -0.37
TUBE1-202ENST00000368662 ARHGAP26Q9UNA1 814 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 MTCH2Q9Y6C9 303 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 DENND4CQ5VZ89 1909 aa12.72□□□□□ -0.37
TUBE1-202ENST00000368662 FAM72CH0Y354 149 aa12.71□□□□□ -0.37
TUBE1-202ENST00000368662 ACSL4O60488 711 aa12.71□□□□□ -0.37
TUBE1-202ENST00000368662 MOSPD3O75425 235 aa12.71□□□□□ -0.37
TUBE1-202ENST00000368662 GJA1P17302 382 aa12.71□□□□□ -0.37
TUBE1-202ENST00000368662 EPHB2P29323 1055 aa12.71□□□□□ -0.37
TUBE1-202ENST00000368662 CORO1AP31146 461 aaKnown RBP12.71□□□□□ -0.37
TUBE1-202ENST00000368662 ADCY2Q08462 1091 aa12.71□□□□□ -0.37
TUBE1-202ENST00000368662 DPYSQ14117 519 aa12.71□□□□□ -0.37
TUBE1-202ENST00000368662 GRIN2CQ14957 1233 aa12.71□□□□□ -0.37
TUBE1-202ENST00000368662 SLC5A9Q2M3M2 681 aa12.71□□□□□ -0.37
TUBE1-202ENST00000368662 GLE1Q53GS7 698 aaKnown RBP12.71□□□□□ -0.37
TUBE1-202ENST00000368662 FAM72AQ5TYM5 149 aa12.71□□□□□ -0.37
TUBE1-202ENST00000368662 PIK3R6Q5UE93 754 aa12.71□□□□□ -0.37
TUBE1-202ENST00000368662 MANEALQ5VSG8 457 aa12.71□□□□□ -0.37
TUBE1-202ENST00000368662 FAM72DQ6L9T8 149 aa12.71□□□□□ -0.37
TUBE1-202ENST00000368662 DRICH1Q6PGQ1 229 aaPredicted RBP12.71□□□□□ -0.37
TUBE1-202ENST00000368662 FAM72BQ86X60 149 aa12.71□□□□□ -0.37
TUBE1-202ENST00000368662 ZDHHC14Q8IZN3 488 aa12.71□□□□□ -0.37
TUBE1-202ENST00000368662 PQLC3Q8N755 202 aa12.71□□□□□ -0.37
TUBE1-202ENST00000368662 PLD5Q8N7P1 536 aa12.71□□□□□ -0.37
TUBE1-202ENST00000368662 MYRIPQ8NFW9 859 aa12.71□□□□□ -0.37
TUBE1-202ENST00000368662 UBXN4Q92575 508 aa12.71□□□□□ -0.37
TUBE1-202ENST00000368662 MAGOHBQ96A72 148 aaKnown RBP12.71□□□□□ -0.37
TUBE1-202ENST00000368662 TCEAL4Q96EI5 215 aa12.71□□□□□ -0.37
TUBE1-202ENST00000368662 SLC22A12Q96S37 553 aa12.71□□□□□ -0.37
TUBE1-202ENST00000368662 RETREG1Q9H6L5 497 aa12.71□□□□□ -0.37
TUBE1-202ENST00000368662 GKN1Q9NS71 199 aa12.71□□□□□ -0.37
TUBE1-202ENST00000368662 E9PAM4 449 aa12.71□□□□□ -0.38
TUBE1-202ENST00000368662 WEE1P30291 646 aa12.71□□□□□ -0.38
TUBE1-202ENST00000368662 SERPINB6P35237 376 aa12.71□□□□□ -0.38
TUBE1-202ENST00000368662 AUHQ13825 339 aaKnown RBP12.71□□□□□ -0.38
TUBE1-202ENST00000368662 RARS2Q5T160 578 aaKnown RBP12.71□□□□□ -0.38
TUBE1-202ENST00000368662 STXBP5Q5T5C0 1151 aa12.71□□□□□ -0.38
TUBE1-202ENST00000368662 TMCO3Q6UWJ1 677 aa12.71□□□□□ -0.38
TUBE1-202ENST00000368662 MAATS1Q7Z4T9 603 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms