RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 VEPH1Q14D04 833 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 SLC1A5Q15758 541 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 ZRANB3Q5FWF4 1079 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 ECHDC2Q86YB7 292 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 C12orf29Q8N999 325 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 GDPD5Q8WTR4 605 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 SPOCK2Q92563 424 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 NT5MQ9NPB1 228 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 CASS4Q9NQ75 786 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 LATS2Q9NRM7 1088 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 IL1RAPL1Q9NZN1 696 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 ZNF212Q9UDV6 495 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 KRT36O76013 467 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 NFKBIAP25963 317 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 HOXD13P35453 343 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 PTP4A2Q12974 167 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 NAB1Q13506 487 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 PIWIL2Q8TC59 973 aaKnown RBP11.97□□□□□ -0.49
COPA-202ENST00000368069 CPXM1Q96SM3 734 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 APBA2Q99767 749 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 MMADHCQ9H3L0 296 aaPredicted RBP11.97□□□□□ -0.49
COPA-202ENST00000368069 SPON1Q9HCB6 807 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 RIC8BQ9NVN3 520 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 HES2Q9Y543 173 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 PCDHA11Q9Y5I1 949 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 A8MUI8 341 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 DDHD2O94830 711 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 FARP2O94887 1054 aaPredicted RBP11.97□□□□□ -0.49
COPA-202ENST00000368069 CD151P48509 253 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 PARP6Q2NL67 630 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 AGKQ53H12 422 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 IRGCQ6NXR0 463 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 AMIGO3Q86WK7 504 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 FITM2Q8N6M3 262 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 RNF148Q8N7C7 305 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 OR52K1Q8NGK4 314 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 PPP2R3CQ969Q6 453 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 DTNBP1Q96EV8 351 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 MRPL42Q9Y6G3 142 aaKnown RBP11.97□□□□□ -0.49
COPA-202ENST00000368069 VAPBO95292 243 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 CYP1A1P04798 512 aaPredicted RBP11.97□□□□□ -0.49
COPA-202ENST00000368069 ATP5BP06576 529 aaKnown RBP11.97□□□□□ -0.49
COPA-202ENST00000368069 RBP1P09455 135 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 IRF1P10914 325 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 RAG1P15918 1043 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 NPY2RP49146 381 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 ARHGEF6Q15052 776 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 OLFML2BQ68BL8 750 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 IYDQ6PHW0 289 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 SNX32Q86XE0 403 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 ZNF184Q99676 751 aaPredicted RBP11.97□□□□□ -0.49
COPA-202ENST00000368069 ZNF670Q9BS34 389 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 MECRQ9BV79 373 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 NMRAL1Q9HBL8 299 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 TRHDEQ9UKU6 1024 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 CNTNAP2Q9UHC6 1331 aa11.97□□□□□ -0.49
COPA-202ENST00000368069 PRPF4O43172 522 aaKnown RBP eCLIP11.96□□□□□ -0.49
COPA-202ENST00000368069 YBX3P16989 372 aaKnown RBP eCLIP11.96□□□□□ -0.493e-8■■□□□ 11.6
COPA-202ENST00000368069 CDKN2BP42772 138 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 CDK7P50613 346 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 CYP1B1Q16678 543 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 NAIF1Q69YI7 327 aaPredicted RBP11.96□□□□□ -0.49
COPA-202ENST00000368069 PTRHD1Q6GMV3 140 aaKnown RBP11.96□□□□□ -0.49
COPA-202ENST00000368069 PLPPR4Q7Z2D5 763 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 PTAR1Q7Z6K3 402 aaPredicted RBP11.96□□□□□ -0.49
COPA-202ENST00000368069 UNC93AQ86WB7 457 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 SPDYE1Q8NFV5 336 aaPredicted RBP11.96□□□□□ -0.49
COPA-202ENST00000368069 PYDC1Q8WXC3 89 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 PIK3R5Q8WYR1 880 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 NKD2Q969F2 451 aaPredicted RBP11.96□□□□□ -0.49
COPA-202ENST00000368069 HIC2Q96JB3 615 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 EBNA1BP2Q99848 306 aaKnown RBP11.96□□□□□ -0.49
COPA-202ENST00000368069 DDX50Q9BQ39 737 aaKnown RBP11.96□□□□□ -0.49
COPA-202ENST00000368069 ULBP1Q9BZM6 244 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 PKP3Q9Y446 797 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 LRCH4O75427 683 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 SOAT2O75908 522 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 SLC25A3Q00325 362 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 BNIP1Q12981 228 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 AASDHQ4L235 1098 aaPredicted RBP11.96□□□□□ -0.49
COPA-202ENST00000368069 EFL1Q7Z2Z2 1120 aaKnown RBP11.96□□□□□ -0.49
COPA-202ENST00000368069 CPT1BQ92523 772 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 POPDC2Q9HBU9 364 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 APOBEC3GQ9HC16 384 aaKnown RBP11.96□□□□□ -0.49
COPA-202ENST00000368069 TRPC7Q9HCX4 862 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 UBDO15205 165 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 GPR182O15218 404 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 PHGDHO43175 533 aaKnown RBP11.96□□□□□ -0.49
COPA-202ENST00000368069 PSMC3P17980 439 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 MAP4P27816 1152 aaKnown RBP11.96□□□□□ -0.49
COPA-202ENST00000368069 ZNF157P51786 506 aaPredicted RBP11.96□□□□□ -0.49
COPA-202ENST00000368069 POU4F1Q01851 419 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 SNX17Q15036 470 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 TTC33Q6PID6 262 aaPredicted RBP11.96□□□□□ -0.49
COPA-202ENST00000368069 ALYREFQ86V81 257 aaKnown RBP11.96□□□□□ -0.49
COPA-202ENST00000368069 PHF21BQ96EK2 531 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 CINPQ9BW66 212 aaPredicted RBP11.96□□□□□ -0.49
COPA-202ENST00000368069 MTFR1LQ9H019 292 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 LHX5Q9H2C1 402 aa11.96□□□□□ -0.49
COPA-202ENST00000368069 ATXN3LQ9H3M9 355 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms