RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 CPA5Q8WXQ8 436 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 P2RY11Q96G91 374 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 PIWIL1Q96J94 861 aaKnown RBP10.24□□□□□ -0.77
CD48-202ENST00000368046 FCRL2Q96LA5 508 aaPredicted RBP10.24□□□□□ -0.77
CD48-202ENST00000368046 SLC2A13Q96QE2 648 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 POLR3BQ9NW08 1133 aaPredicted RBP10.24□□□□□ -0.77
CD48-202ENST00000368046 TMEM51Q9NW97 253 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 RRN3Q9NYV6 651 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 EBF1Q9UH73 591 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 MYO6Q9UM54 1294 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 KCNU1A8MYU2 1149 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 GOLGA6L19H0YKK7 550 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 SGK1O00141 431 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 GRAP2O75791 330 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 ALDH1A2O94788 518 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 KLF8O95600 359 aaPredicted RBP10.23□□□□□ -0.77
CD48-202ENST00000368046 APBB3O95704 486 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 F9P00740 461 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 APOEP02649 317 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 HNRNPLP14866 589 aaKnown RBP eCLIP10.23□□□□□ -0.77
CD48-202ENST00000368046 FERP16591 822 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 ABCB4P21439 1286 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 NTSR1P30989 418 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 HOXC13P31276 330 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 CCR1P32246 355 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 MATKP42679 507 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 PXNP49023 591 aaPredicted RBP10.23□□□□□ -0.77
CD48-202ENST00000368046 DGKEP52429 567 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 RNASE9P60153 205 aaKnown RBP10.23□□□□□ -0.77
CD48-202ENST00000368046 NOMO3P69849 1222 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 FMO1Q01740 532 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 DMWDQ09019 674 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 MTA1Q13330 715 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 E2F5Q15329 346 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 TRIM72Q6ZMU5 477 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 IRF2BP2Q7Z5L9 587 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 TAC4Q86UU9 113 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 LUZP1Q86V48 1076 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 XYLT1Q86Y38 959 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 ZNF513Q8N8E2 541 aaPredicted RBP10.23□□□□□ -0.77
CD48-202ENST00000368046 ATP6V0D2Q8N8Y2 350 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 ZNF557Q8N988 423 aaPredicted RBP10.23□□□□□ -0.77
CD48-202ENST00000368046 SLC20A1Q8WUM9 679 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 RNF34Q969K3 372 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 NT5C3BQ969T7 300 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 BTN2A3PQ96KV6 586 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 EDEM3Q9BZQ6 932 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 EPC1Q9H2F5 836 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 POLMQ9NP87 494 aaPredicted RBP10.23□□□□□ -0.77
CD48-202ENST00000368046 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.23□□□□□ -0.77
CD48-202ENST00000368046 HCN2Q9UL51 889 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 CLEC4EQ9ULY5 219 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 DMDP11532 3685 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 HELZP42694 1942 aaKnown RBP10.23□□□□□ -0.77
CD48-202ENST00000368046 MIA3Q5JRA6 1907 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 MYO15AQ9UKN7 3530 aa10.23□□□□□ -0.77
CD48-202ENST00000368046 ZFHX2Q9C0A1 2572 aaPredicted RBP10.22□□□□□ -0.77
CD48-202ENST00000368046 CACNA1HO95180 2353 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 M0QYT0 321 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 NPC1O15118 1278 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 AXIN1O15169 862 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 DAB1O75553 588 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 UNGP13051 313 aaPredicted RBP10.22□□□□□ -0.77
CD48-202ENST00000368046 MMP8P22894 467 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 HOXD9P28356 352 aaPredicted RBP10.22□□□□□ -0.77
CD48-202ENST00000368046 SLC6A4P31645 630 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 UBASH3AP57075 661 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 PITX1P78337 314 aaPredicted RBP10.22□□□□□ -0.77
CD48-202ENST00000368046 FANCCQ00597 558 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 ARID5AQ03989 594 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 SIM2Q14190 667 aaPredicted RBP10.22□□□□□ -0.77
CD48-202ENST00000368046 GEN1Q17RS7 908 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 FAM133BQ5BKY9 247 aaKnown RBP10.22□□□□□ -0.77
CD48-202ENST00000368046 MS4A13Q5J8X5 152 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 NAA35Q5VZE5 725 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 NADSYN1Q6IA69 706 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 RFWD3Q6PCD5 774 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 ARCQ7LC44 396 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 KIAA0907Q7Z7F0 614 aaPredicted RBP10.22□□□□□ -0.77
CD48-202ENST00000368046 RASSF3Q86WH2 238 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 TSTD1Q8NFU3 115 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 FIBINQ8TAL6 211 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 UCMAQ8WVF2 138 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 HHIPQ96QV1 700 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 PCDHB18PQ96TA0 734 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 NPY6RQ99463 290 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 AGPAT1Q99943 283 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 WDCPQ9H6R7 721 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 DDIT4Q9NX09 232 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 ELOVL2Q9NXB9 296 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 TMEM59LQ9UK28 342 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 CACNA1IQ9P0X4 2223 aa10.22□□□□□ -0.77
CD48-202ENST00000368046 TYW5A2RUC4 315 aaKnown RBP10.21□□□□□ -0.77
CD48-202ENST00000368046 TBL1XO60907 577 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 ADAM23O75077 832 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 ENDOD1O94919 500 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 MOCS2O96007 188 aaPredicted RBP10.21□□□□□ -0.77
CD48-202ENST00000368046 HLA-FP30511 346 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 NME3Q13232 169 aa10.21□□□□□ -0.77
CD48-202ENST00000368046 EIF4HQ15056 248 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms