RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 TLR4O00206 839 aa15.36■□□□□ 0.05
VAMP4-202ENST00000367740 TIMM44O43615 452 aa15.36■□□□□ 0.05
VAMP4-202ENST00000367740 SDC3O75056 442 aa15.36■□□□□ 0.05
VAMP4-202ENST00000367740 CSO75390 466 aaKnown RBP15.36■□□□□ 0.05
VAMP4-202ENST00000367740 RARGP13631 454 aa15.36■□□□□ 0.05
VAMP4-202ENST00000367740 ITGB6P18564 788 aa15.36■□□□□ 0.05
VAMP4-202ENST00000367740 C10orf120Q5SQS8 335 aa15.36■□□□□ 0.05
VAMP4-202ENST00000367740 ARL6IP4Q66PJ3 421 aaKnown RBP15.36■□□□□ 0.05
VAMP4-202ENST00000367740 ZNF776Q68DI1 518 aaPredicted RBP15.36■□□□□ 0.05
VAMP4-202ENST00000367740 USP30Q70CQ3 517 aa15.36■□□□□ 0.05
VAMP4-202ENST00000367740 CBWD2Q8IUF1 395 aa15.36■□□□□ 0.05
VAMP4-202ENST00000367740 AK8Q96MA6 479 aa15.36■□□□□ 0.05
VAMP4-202ENST00000367740 LLPHQ9BRT6 129 aaKnown RBP15.36■□□□□ 0.05
VAMP4-202ENST00000367740 FGFBP2Q9BYJ0 223 aa15.36■□□□□ 0.05
VAMP4-202ENST00000367740 SLC2A11Q9BYW1 496 aa15.36■□□□□ 0.05
VAMP4-202ENST00000367740 PABPC3Q9H361 631 aaKnown RBP15.36■□□□□ 0.05
VAMP4-202ENST00000367740 CSNK1G1Q9HCP0 422 aa15.36■□□□□ 0.05
VAMP4-202ENST00000367740 SCML2Q9UQR0 700 aa15.36■□□□□ 0.05
VAMP4-202ENST00000367740 ZNF510Q9Y2H8 683 aa15.36■□□□□ 0.05
VAMP4-202ENST00000367740 SPENQ96T58 3664 aaKnown RBP15.36■□□□□ 0.05
VAMP4-202ENST00000367740 A0A1W2PNU3 283 aaPredicted RBP15.35■□□□□ 0.05
VAMP4-202ENST00000367740 OPA1O60313 960 aa15.35■□□□□ 0.05
VAMP4-202ENST00000367740 GCNT3O95395 438 aa15.35■□□□□ 0.05
VAMP4-202ENST00000367740 CCDC130P13994 396 aa15.35■□□□□ 0.05
VAMP4-202ENST00000367740 CR2P20023 1033 aa15.35■□□□□ 0.05
VAMP4-202ENST00000367740 HLA-FP30511 346 aa15.35■□□□□ 0.05
VAMP4-202ENST00000367740 CORO1AP31146 461 aaKnown RBP15.35■□□□□ 0.05
VAMP4-202ENST00000367740 UBA7P41226 1012 aa15.35■□□□□ 0.05
VAMP4-202ENST00000367740 MAP3K7CLP57077 242 aa15.35■□□□□ 0.05
VAMP4-202ENST00000367740 ARL13BQ3SXY8 428 aa15.35■□□□□ 0.05
VAMP4-202ENST00000367740 ZC3H3Q8IXZ2 948 aaKnown RBP15.35■□□□□ 0.05
VAMP4-202ENST00000367740 SYCP3Q8IZU3 236 aa15.35■□□□□ 0.05
VAMP4-202ENST00000367740 GOLGA1Q92805 767 aa15.35■□□□□ 0.05
VAMP4-202ENST00000367740 RSPH9Q9H1X1 276 aaPredicted RBP15.35■□□□□ 0.05
VAMP4-202ENST00000367740 SMYD3Q9H7B4 428 aa15.35■□□□□ 0.05
VAMP4-202ENST00000367740 FBXL12Q9NXK8 326 aa15.35■□□□□ 0.05
VAMP4-202ENST00000367740 SEL1LQ9UBV2 794 aa15.35■□□□□ 0.05
VAMP4-202ENST00000367740 AGO1Q9UL18 857 aaKnown RBP15.35■□□□□ 0.05
VAMP4-202ENST00000367740 NCKAP1Q9Y2A7 1128 aa15.35■□□□□ 0.05
VAMP4-202ENST00000367740 ATMINO43313 823 aaPredicted RBP15.34■□□□□ 0.05
VAMP4-202ENST00000367740 CYBBP04839 570 aa15.34■□□□□ 0.05
VAMP4-202ENST00000367740 HOXD9P28356 352 aaPredicted RBP15.34■□□□□ 0.05
VAMP4-202ENST00000367740 ASIC1P78348 528 aa15.34■□□□□ 0.05
VAMP4-202ENST00000367740 HMGN5P82970 282 aaKnown RBP15.34■□□□□ 0.05
VAMP4-202ENST00000367740 DAB2P98082 770 aa15.34■□□□□ 0.05
VAMP4-202ENST00000367740 ZNF211Q13398 564 aaPredicted RBP15.34■□□□□ 0.05
VAMP4-202ENST00000367740 SURF1Q15526 300 aa15.34■□□□□ 0.05
VAMP4-202ENST00000367740 RILPL1Q5EBL4 403 aa15.34■□□□□ 0.05
VAMP4-202ENST00000367740 C3orf38Q5JPI3 329 aa15.34■□□□□ 0.05
VAMP4-202ENST00000367740 CPXM2Q8N436 756 aa15.34■□□□□ 0.05
VAMP4-202ENST00000367740 FAM184AQ8NB25 1140 aa15.34■□□□□ 0.05
VAMP4-202ENST00000367740 OR2T34Q8NGX1 318 aa15.34■□□□□ 0.05
VAMP4-202ENST00000367740 GANCQ8TET4 914 aa15.34■□□□□ 0.05
VAMP4-202ENST00000367740 DDI1Q8WTU0 396 aa15.34■□□□□ 0.05
VAMP4-202ENST00000367740 SERAC1Q96JX3 654 aa15.34■□□□□ 0.05
VAMP4-202ENST00000367740 XYLT2Q9H1B5 865 aa15.34■□□□□ 0.05
VAMP4-202ENST00000367740 PLA2G4CQ9UP65 541 aa15.34■□□□□ 0.05
VAMP4-202ENST00000367740 SATB2Q9UPW6 733 aa15.34■□□□□ 0.05
VAMP4-202ENST00000367740 KIF26BQ2KJY2 2108 aa15.34■□□□□ 0.05
VAMP4-202ENST00000367740 DOCK9Q9BZ29 2069 aa15.33■□□□□ 0.04
VAMP4-202ENST00000367740 A0A1B0GVM2 712 aa15.33■□□□□ 0.04
VAMP4-202ENST00000367740 LRRC72A6NJI9 287 aa15.33■□□□□ 0.04
VAMP4-202ENST00000367740 ZNF233A6NK53 670 aa15.33■□□□□ 0.04
VAMP4-202ENST00000367740 HHLA1C9JL84 531 aa15.33■□□□□ 0.04
VAMP4-202ENST00000367740 LZTS3O60299 673 aaPredicted RBP15.33■□□□□ 0.04
VAMP4-202ENST00000367740 STAU1O95793 577 aaKnown RBP15.33■□□□□ 0.04
VAMP4-202ENST00000367740 HMBSP08397 361 aa15.33■□□□□ 0.04
VAMP4-202ENST00000367740 CCR5P51681 352 aa15.33■□□□□ 0.04
VAMP4-202ENST00000367740 NEK4P51957 841 aa15.33■□□□□ 0.04
VAMP4-202ENST00000367740 TLE1Q04724 770 aa15.33■□□□□ 0.04
VAMP4-202ENST00000367740 PDE4CQ08493 712 aa15.33■□□□□ 0.04
VAMP4-202ENST00000367740 CLN3Q13286 438 aa15.33■□□□□ 0.04
VAMP4-202ENST00000367740 CHST9Q7L1S5 443 aa15.33■□□□□ 0.04
VAMP4-202ENST00000367740 ADIPOR2Q86V24 386 aa15.33■□□□□ 0.04
VAMP4-202ENST00000367740 FAM217AQ8IXS0 508 aa15.33■□□□□ 0.04
VAMP4-202ENST00000367740 SLC2A14Q8TDB8 520 aa15.33■□□□□ 0.04
VAMP4-202ENST00000367740 CCDC97Q96F63 343 aaPredicted RBP15.33■□□□□ 0.04
VAMP4-202ENST00000367740 SLC46A1Q96NT5 459 aa15.33■□□□□ 0.04
VAMP4-202ENST00000367740 NEUROG2Q9H2A3 272 aa15.33■□□□□ 0.04
VAMP4-202ENST00000367740 MTG2Q9H4K7 406 aa15.33■□□□□ 0.04
VAMP4-202ENST00000367740 OLFML3Q9NRN5 406 aa15.33■□□□□ 0.04
VAMP4-202ENST00000367740 TJP2Q9UDY2 1190 aa15.33■□□□□ 0.04
VAMP4-202ENST00000367740 SCML1Q9UN30 329 aa15.33■□□□□ 0.04
VAMP4-202ENST00000367740 A0A1W2PP55 124 aa15.32■□□□□ 0.04
VAMP4-202ENST00000367740 CLEC18AA5D8T8 446 aa15.32■□□□□ 0.04
VAMP4-202ENST00000367740 EFSO43281 561 aa15.32■□□□□ 0.04
VAMP4-202ENST00000367740 MYL6P60660 151 aa15.32■□□□□ 0.04
VAMP4-202ENST00000367740 EHHADHQ08426 723 aa15.32■□□□□ 0.04
VAMP4-202ENST00000367740 ZSCAN23Q3MJ62 389 aa15.32■□□□□ 0.04
VAMP4-202ENST00000367740 SLC45A4Q5BKX6 768 aa15.32■□□□□ 0.04
VAMP4-202ENST00000367740 CLEC18BQ6UXF7 455 aa15.32■□□□□ 0.04
VAMP4-202ENST00000367740 SCD5Q86SK9 330 aa15.32■□□□□ 0.04
VAMP4-202ENST00000367740 ACOT1Q86TX2 421 aa15.32■□□□□ 0.04
VAMP4-202ENST00000367740 DENND1CQ8IV53 801 aa15.32■□□□□ 0.04
VAMP4-202ENST00000367740 SLC25A45Q8N413 288 aa15.32■□□□□ 0.04
VAMP4-202ENST00000367740 CLEC18CQ8NCF0 446 aa15.32■□□□□ 0.04
VAMP4-202ENST00000367740 OR4C6Q8NH72 309 aa15.32■□□□□ 0.04
VAMP4-202ENST00000367740 RASSF8Q8NHQ8 419 aa15.32■□□□□ 0.04
VAMP4-202ENST00000367740 WFIKKN2Q8TEU8 576 aa15.32■□□□□ 0.04
VAMP4-202ENST00000367740 JAKMIP2Q96AA8 810 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms