RNA–Protein interactions for RNA: ENST00000367367.8

PTPRC-203, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-203ENST00000367367 IRF2BP1Q8IU81 584 aa3.32□□□□□ -1.88
PTPRC-203ENST00000367367 TRIM59Q8IWR1 403 aa3.32□□□□□ -1.88
PTPRC-203ENST00000367367 C12orf29Q8N999 325 aa3.32□□□□□ -1.88
PTPRC-203ENST00000367367 TDRD5Q8NAT2 981 aaKnown RBP3.32□□□□□ -1.88
PTPRC-203ENST00000367367 B3GALNT2Q8NCR0 500 aa3.32□□□□□ -1.88
PTPRC-203ENST00000367367 OR6P1Q8NGX9 317 aa3.32□□□□□ -1.88
PTPRC-203ENST00000367367 SPPL2BQ8TCT7 592 aa3.32□□□□□ -1.88
PTPRC-203ENST00000367367 HDAC7Q8WUI4 952 aa3.32□□□□□ -1.88
PTPRC-203ENST00000367367 RSAD2Q8WXG1 361 aa3.32□□□□□ -1.88
PTPRC-203ENST00000367367 FGF13Q92913 245 aa3.32□□□□□ -1.88
PTPRC-203ENST00000367367 FUBP3Q96I24 572 aaKnown RBP eCLIP3.32□□□□□ -1.88
PTPRC-203ENST00000367367 MYADMQ96S97 322 aa3.32□□□□□ -1.88
PTPRC-203ENST00000367367 CRACR2AQ9BSW2 395 aa3.32□□□□□ -1.88
PTPRC-203ENST00000367367 ZNF518BQ9C0D4 1074 aa3.32□□□□□ -1.88
PTPRC-203ENST00000367367 CEP44Q9C0F1 390 aa3.32□□□□□ -1.88
PTPRC-203ENST00000367367 SNX25Q9H3E2 840 aa3.32□□□□□ -1.88
PTPRC-203ENST00000367367 FBRSQ9HAH7 460 aa3.32□□□□□ -1.88
PTPRC-203ENST00000367367 ZNF334Q9HCZ1 680 aaPredicted RBP3.32□□□□□ -1.88
PTPRC-203ENST00000367367 FAM49BQ9NUQ9 324 aa3.32□□□□□ -1.88
PTPRC-203ENST00000367367 SPTLC3Q9NUV7 552 aa3.32□□□□□ -1.88
PTPRC-203ENST00000367367 RAB20Q9NX57 234 aa3.32□□□□□ -1.88
PTPRC-203ENST00000367367 NFE2L3Q9Y4A8 694 aa3.32□□□□□ -1.88
PTPRC-203ENST00000367367 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.32□□□□□ -1.88
PTPRC-203ENST00000367367 SCINQ9Y6U3 715 aa3.32□□□□□ -1.88
PTPRC-203ENST00000367367 ARID1BQ8NFD5 2236 aaPredicted RBP3.32□□□□□ -1.88
PTPRC-203ENST00000367367 KNL1Q8NG31 2342 aa3.32□□□□□ -1.88
PTPRC-203ENST00000367367 NYNRINQ9P2P1 1898 aaKnown RBP3.32□□□□□ -1.88
PTPRC-203ENST00000367367 EP300Q09472 2414 aaPredicted RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 PTPRZ1P23471 2315 aaPredicted RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 TCRBV16S1A1N1A0A5B0 115 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 DCDC2BA2VCK2 349 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 A6NCN8 305 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 LOC730098B7Z3J9 87 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 F8VP50 259 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 SHOXO15266 292 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 FBXO21O94952 628 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 PAPLNO95428 1278 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 C1RP00736 705 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 CCDC192P0DO97 292 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 RARAP10276 462 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 HAPLN1P10915 354 aaPredicted RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 PABPC1P11940 636 aaKnown RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 MYL4P12829 197 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 P4HA1P13674 534 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 GABRR2P28476 465 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 GTF2H1P32780 548 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 GRIK1P39086 918 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 MTIF2P46199 727 aaKnown RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 ALDH1A3P47895 512 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 EPHB3P54753 998 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 CYP4F8P98187 520 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 ENPEPQ07075 957 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 INCA1Q0VD86 236 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 TRIM14Q14142 442 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 GBX1Q14549 363 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 LLGL1Q15334 1064 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 MAPRE1Q15691 268 aaKnown RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 STX1AQ16623 288 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 KLHL40Q2TBA0 621 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 CFAP221Q4G0U5 840 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 ANO6Q4KMQ2 910 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 IQCEQ6IPM2 695 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 FAM171BQ6P995 826 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 C4orf50Q6ZRC1 276 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 GAREM2Q75VX8 874 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 PDZD4Q76G19 769 aaPredicted RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 NLRC3Q7RTR2 1065 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 SRLQ86TD4 932 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 SPATS2Q86XZ4 545 aaKnown RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 TMC8Q8IU68 726 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 SPATA2LQ8IUW3 424 aaPredicted RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 SCN4BQ8IWT1 228 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 DCP1BQ8IZD4 617 aaKnown RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 FUKQ8N0W3 1084 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 LINC00528Q8N1L1 170 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 ELMOD1Q8N336 334 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 PPM1KQ8N3J5 372 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 CCDC150Q8NCX0 1101 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 MYCBPAPQ8TBZ2 947 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 RNF217Q8TC41 542 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 SPATA18Q8TC71 538 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 FGF14Q92915 247 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 KAT5Q92993 513 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 PSMG2Q969U7 264 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 JAKMIP2Q96AA8 810 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 ZNF512Q96ME7 567 aaPredicted RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 KCNK16Q96T55 309 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 CDC6Q99741 560 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 SLITRK6Q9H5Y7 841 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 CBX8Q9HC52 389 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 ASAH2Q9NR71 780 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 KRT82Q9NSB4 513 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 CISHQ9NSE2 258 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 INTS7Q9NVH2 962 aaKnown RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 PGPEP1Q9NXJ5 209 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 GCNT4Q9P109 453 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 CDH9Q9ULB4 789 aa3.31□□□□□ -1.88
PTPRC-203ENST00000367367 MAGED2Q9UNF1 606 aaPredicted RBP3.31□□□□□ -1.88
PTPRC-203ENST00000367367 DMTF1Q9Y222 760 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms