RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 SLC26A11Q86WA9 606 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 LZTR1Q8N653 840 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 QRFPRQ96P65 431 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 NMRAL1Q9HBL8 299 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 COQ6Q9Y2Z9 468 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 IQSEC2Q5JU85 1478 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 CD163L1Q9NR16 1453 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 A0A087X0T9 212 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 UBDO15205 165 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 CPA3P15088 417 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 GPR15P49685 360 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 CCR4P51679 360 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 TCEAL5Q5H9L2 206 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 PRMT9Q6P2P2 845 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 EDEM1Q92611 657 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 TMEM237Q96Q45 408 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 NEK6Q9HC98 313 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 ZCCHC17Q9NP64 241 aaKnown RBP16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 BATF3Q9NR55 127 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 AKAP5P24588 427 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 ANTXR2P58335 489 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 IL2P60568 153 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 SPIDRQ14159 915 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 ZCCHC11Q5TAX3 1644 aaKnown RBP16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 ADPRHL2Q9NX46 363 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 TIMM13Q9Y5L4 95 aaPredicted RBP16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 KPNA3O00505 521 aaPredicted RBP16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 KATNA1O75449 491 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 GHRP10912 638 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 PIK3CGP48736 1102 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 PAGE2BQ5JRK9 111 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 USP45Q70EL2 814 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 ZNF410Q86VK4 478 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 SPPL2AQ8TCT8 520 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 MCCC1Q96RQ3 725 aaPredicted RBP16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 EHD4Q9H223 541 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 ZFYVE1Q9HBF4 777 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 TMX2Q9Y320 296 aa16.07■□□□□ 0.16
NUCKS1-201ENST00000367142 C1orf167Q5SNV9 1468 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 CXCL11O14625 94 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 PRMT3O60678 531 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 AMD1P17707 334 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 NTSP30990 170 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 TFAP2DQ7Z6R9 452 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 FBXO39Q8N4B4 442 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 OR56A4Q8NGH8 313 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 ZSCAN18Q8TBC5 510 aaPredicted RBP16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 PAFAH2Q99487 392 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 IRX2Q9BZI1 471 aaPredicted RBP16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 HEY2Q9UBP5 337 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 HSMCR30P0CW71 290 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 TGFB3P10600 412 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 INSRRP14616 1297 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 ATP12AP54707 1039 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 HERVK_113P62684 666 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 DDR2Q16832 855 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 TRIM16LQ309B1 348 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 GRTP1Q5TC63 336 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 CELF6Q96J87 481 aaKnown RBP16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 PPIEQ9UNP9 301 aaKnown RBP16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 CENPXA8MT69 81 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 FAM20BO75063 409 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 ACADSP16219 412 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 LSP1P33241 339 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 PSMC6P62333 389 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 KLHL31Q9H511 634 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 BIKQ13323 160 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 ZNHIT3Q15649 155 aaPredicted RBP16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 FAM98BQ52LJ0 330 aaKnown RBP16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 DGKKQ5KSL6 1271 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 PDPK2PQ6A1A2 396 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 UTP15Q8TED0 518 aaKnown RBP16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 ATG4AQ8WYN0 398 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 RMND5BQ96G75 393 aaPredicted RBP16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 HDHD2Q9H0R4 259 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 UBP1Q9NZI7 540 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 SIK3Q9Y2K2 1263 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 ADGRA3Q8IWK6 1321 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 MLH1P40692 756 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 CASP4P49662 377 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 PSEN2P49810 448 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 PABPC1LQ4VXU2 614 aaKnown RBP16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 TBL1YQ9BQ87 522 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 LRRC4BQ9NT99 713 aa16.06■□□□□ 0.16
NUCKS1-201ENST00000367142 A0A0A6YYK5 440 aaPredicted RBP16.05■□□□□ 0.16
NUCKS1-201ENST00000367142 VPS4BO75351 444 aa16.05■□□□□ 0.16
NUCKS1-201ENST00000367142 PROSCO94903 275 aa16.05■□□□□ 0.16
NUCKS1-201ENST00000367142 GYPCP04921 128 aa16.05■□□□□ 0.16
NUCKS1-201ENST00000367142 TARSP26639 723 aaKnown RBP16.05■□□□□ 0.16
NUCKS1-201ENST00000367142 TCEA2Q15560 299 aa16.05■□□□□ 0.16
NUCKS1-201ENST00000367142 INAQ16352 499 aa16.05■□□□□ 0.16
NUCKS1-201ENST00000367142 LY6KQ17RY6 165 aa16.05■□□□□ 0.16
NUCKS1-201ENST00000367142 ARMC12Q5T9G4 340 aa16.05■□□□□ 0.16
NUCKS1-201ENST00000367142 C11orf63Q6NUN7 778 aa16.05■□□□□ 0.16
NUCKS1-201ENST00000367142 DENND6AQ8IWF6 608 aa16.05■□□□□ 0.16
NUCKS1-201ENST00000367142 MRPL17Q9NRX2 175 aaKnown RBP16.05■□□□□ 0.16
NUCKS1-201ENST00000367142 TAS2R13Q9NYV9 303 aa16.05■□□□□ 0.16
NUCKS1-201ENST00000367142 UBA2Q9UBT2 640 aaPredicted RBP16.05■□□□□ 0.16
NUCKS1-201ENST00000367142 ALKQ9UM73 1620 aa16.05■□□□□ 0.16
NUCKS1-201ENST00000367142 ZBTB14O43829 449 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms