RNA–Protein interactions for RNA: ENST00000366942.3

USH2A-202, Transcript of usherin, humanhuman

TSL 1 (best) BASIC

Gene USH2A, Length 6,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-202ENST00000366942 DLC1Q96QB1 1528 aa4.21□□□□□ -1.74
USH2A-202ENST00000366942 MAP1BP46821 2468 aaKnown RBP4.21□□□□□ -1.74
USH2A-202ENST00000366942 FAM196BA6NMK8 535 aa4.21□□□□□ -1.74
USH2A-202ENST00000366942 PRRG2O14669 202 aa4.21□□□□□ -1.74
USH2A-202ENST00000366942 OGTO15294 1046 aa4.21□□□□□ -1.74
USH2A-202ENST00000366942 KRT1P04264 644 aa4.21□□□□□ -1.74
USH2A-202ENST00000366942 PSMC3P17980 439 aa4.21□□□□□ -1.74
USH2A-202ENST00000366942 PRDX5P30044 214 aa4.21□□□□□ -1.74
USH2A-202ENST00000366942 CCR10P46092 362 aa4.21□□□□□ -1.74
USH2A-202ENST00000366942 ACTR2P61160 394 aa4.21□□□□□ -1.74
USH2A-202ENST00000366942 ABCE1P61221 599 aaKnown RBP4.21□□□□□ -1.74
USH2A-202ENST00000366942 YWHAGP61981 247 aaKnown RBP eCLIP4.21□□□□□ -1.74
USH2A-202ENST00000366942 DYNLL1P63167 89 aaKnown RBP4.21□□□□□ -1.74
USH2A-202ENST00000366942 ACY1Q03154 408 aa4.21□□□□□ -1.74
USH2A-202ENST00000366942 STX5Q13190 355 aa4.21□□□□□ -1.74
USH2A-202ENST00000366942 MORC3Q14149 939 aa4.21□□□□□ -1.74
USH2A-202ENST00000366942 LPAL2Q16609 132 aa4.21□□□□□ -1.74
USH2A-202ENST00000366942 DUOXA1Q1HG43 343 aa4.21□□□□□ -1.74
USH2A-202ENST00000366942 FBXO47Q5MNV8 452 aa4.21□□□□□ -1.74
USH2A-202ENST00000366942 MRNIPQ6NTE8 343 aa4.21□□□□□ -1.74
USH2A-202ENST00000366942 TAGAPQ8N103 731 aa4.21□□□□□ -1.74
USH2A-202ENST00000366942 DBF4BQ8NFT6 615 aa4.21□□□□□ -1.74
USH2A-202ENST00000366942 MEIS3Q99687 375 aa4.21□□□□□ -1.74
USH2A-202ENST00000366942 RTKNQ9BST9 563 aa4.21□□□□□ -1.74
USH2A-202ENST00000366942 ZMAT5Q9UDW3 170 aaKnown RBP4.21□□□□□ -1.74
USH2A-202ENST00000366942 SPIN1Q9Y657 262 aaPredicted RBP4.21□□□□□ -1.74
USH2A-202ENST00000366942 A0A1B0GTW7 788 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 RBM47A0AV96 593 aaKnown RBP4.2□□□□□ -1.74
USH2A-202ENST00000366942 H3BQ06 376 aaPredicted RBP4.2□□□□□ -1.74
USH2A-202ENST00000366942 PALMO75781 387 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 CCNB1P14635 433 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 YWHABP31946 246 aaKnown RBP4.2□□□□□ -1.74
USH2A-202ENST00000366942 GRK6P43250 576 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 C14orf28Q4W4Y0 310 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 FIP1L1Q6UN15 594 aaKnown RBP4.2□□□□□ -1.74
USH2A-202ENST00000366942 KCNT2Q6UVM3 1135 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 PEX26Q7Z412 305 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 SLC9B2Q86UD5 537 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 TRAPPC5Q8IUR0 188 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 ZNF34Q8IZ26 560 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 ADGRG2Q8IZP9 1017 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 MLKLQ8NB16 471 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 AMDHD1Q96NU7 426 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 MXRA8Q9BRK3 442 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 RAB11FIP5Q9BXF6 653 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 RAB17Q9H0T7 212 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 ASB7Q9H672 318 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 ZFYVE1Q9HBF4 777 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 SERINC1Q9NRX5 453 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 GID8Q9NWU2 228 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 UVRAGQ9P2Y5 699 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 LIMD1Q9UGP4 676 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 RARRES3Q9UL19 164 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 TMPRSS11EQ9UL52 423 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 ADGRG1Q9Y653 693 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 DUSP10Q9Y6W6 482 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 CCL16O15467 120 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 PRPF3O43395 683 aaKnown RBP4.2□□□□□ -1.74
USH2A-202ENST00000366942 HIP1RO75146 1068 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 CYP17A1P05093 508 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 INHBAP08476 426 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 DRD4P21917 467 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 AMPD1P23109 780 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 MAGEA10P43363 369 aaPredicted RBP4.2□□□□□ -1.74
USH2A-202ENST00000366942 TMED10P49755 219 aaKnown RBP4.2□□□□□ -1.74
USH2A-202ENST00000366942 VAV2P52735 878 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 PRKAG1P54619 331 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 FKBP3Q00688 224 aaKnown RBP4.2□□□□□ -1.74
USH2A-202ENST00000366942 AMZ1Q400G9 498 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 ARMC12Q5T9G4 340 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 TTC39BQ5VTQ0 682 aaPredicted RBP4.2□□□□□ -1.74
USH2A-202ENST00000366942 DOK6Q6PKX4 331 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 KRT77Q7Z794 578 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 HID1Q8IV36 788 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 PROM2Q8N271 834 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 LXNQ9BS40 222 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 TAPBPLQ9BX59 468 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 BRD8Q9H0E9 1235 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 CYP3A43Q9HB55 503 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 CAPN10Q9HC96 672 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 RGS18Q9NS28 235 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 ITGB1BP2Q9UKP3 347 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 TMCC3Q9ULS5 477 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 MAPK8IP1Q9UQF2 711 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.2□□□□□ -1.74
USH2A-202ENST00000366942 SMIM35A0A1B0GVV1 85 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 CBX4O00257 560 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 PLOD2O00469 737 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 SERPINF2P08697 491 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 PAEPP09466 180 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 NR2F2P24468 414 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 CASP2P42575 452 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 GJA8P48165 433 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 RAB28P51157 221 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 PSMC1P62191 440 aaKnown RBP4.2□□□□□ -1.74
USH2A-202ENST00000366942 ALDH6A1Q02252 535 aaKnown RBP4.2□□□□□ -1.74
USH2A-202ENST00000366942 KDSRQ06136 332 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 LRRC41Q15345 812 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 MOGQ16653 247 aa4.2□□□□□ -1.74
USH2A-202ENST00000366942 ZRANB3Q5FWF4 1079 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms