RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 ABI2Q9NYB9 513 aaPredicted RBP12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 MORF4L1Q9UBU8 362 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 URB1O60287 2271 aaKnown RBP12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 NCALDP61601 193 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 MAMLD1Q13495 774 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 PDK4Q16654 411 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 COLGALT1Q8NBJ5 622 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 CATSPER2Q96P56 530 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 TMCC3Q9ULS5 477 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 SEC24DO94855 1032 aaPredicted RBP12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 LCA5LO95447 670 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 MGAT5BQ3V5L5 792 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 SMYD5Q6GMV2 418 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 APOBEC3HQ6NTF7 200 aaKnown RBP12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 DNAJC19Q96DA6 116 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 UGT2B28Q9BY64 529 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 A0A087X0B3 334 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 ARRDC4Q8NCT1 418 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 RNPEPL1Q9HAU8 725 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 UBE2Q2LH0YL09 131 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 PECAM1P16284 738 aaPredicted RBP12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 ZNF23P17027 643 aa12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 N4BP2L1Q5TBK1 243 aaPredicted RBP12.32□□□□□ -0.44
CDC42BPA-203ENST00000366766 MSH3P20585 1137 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 RANBP1P43487 201 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 BFSP2Q13515 415 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 DEFB107AQ8IZN7 70 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 BAP1Q92560 729 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 MRPL9Q9BYD2 267 aaKnown RBP12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 ME2P23368 584 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 PIWIL2Q8TC59 973 aaKnown RBP12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 POPDC2Q9HBU9 364 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 CNGA2Q16280 664 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 KCNT1Q5JUK3 1230 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 SVOPQ8N4V2 548 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 SLC25A41Q8N5S1 370 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 DIS3LQ8TF46 1054 aaKnown RBP12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 PNMA8CA0A1B0GUJ8 204 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 RNF103O00237 685 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 FCHO1O14526 889 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 SASH3O75995 380 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 CES1P23141 567 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 PPP2R1BP30154 601 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 GRK3P35626 688 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 CENPLQ8N0S6 344 aaPredicted RBP12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 PPP1R10Q96QC0 940 aaKnown RBP12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 ACSS3Q9H6R3 686 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 CHST12Q9NRB3 414 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 KIAA2013Q8IYS2 634 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 DDX28Q9NUL7 540 aaKnown RBP12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 WDR70Q9NW82 654 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 SLC25A13Q9UJS0 675 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 OR1G1P47890 313 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 CLCN3P51790 818 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 NET1Q7Z628 596 aaPredicted RBP12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 VSIG10LQ86VR7 867 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 CCDC60Q8IWA6 550 aaPredicted RBP12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 RMND5BQ96G75 393 aaPredicted RBP12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 APOL4Q9BPW4 351 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 UNC5CO95185 931 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 OCM2P0CE71 109 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 OCMP0CE72 109 aaPredicted RBP12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 TKTL1P51854 596 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 BBS12Q6ZW61 710 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 KDELC2Q7Z4H8 507 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 CROCCP3Q8IVE0 287 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 MIER2Q8N344 545 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 USP33Q8TEY7 942 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 SOCS4Q8WXH5 440 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 ART4Q93070 314 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 NR1H4Q96RI1 486 aaPredicted RBP12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 APOL5Q9BWW9 433 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 ADAM30Q9UKF2 790 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 PSMD10O75832 226 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 CCDC130P13994 396 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 POLD2P49005 469 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 SLC44A4Q53GD3 710 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 ALLCQ8N6M5 410 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 MRPS31Q92665 395 aaKnown RBP12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 HAS1Q92839 578 aa12.31□□□□□ -0.44
CDC42BPA-203ENST00000366766 RAD51BO15315 384 aa12.3□□□□□ -0.44
CDC42BPA-203ENST00000366766 WDR59Q6PJI9 974 aa12.3□□□□□ -0.44
CDC42BPA-203ENST00000366766 RAD18Q9NS91 495 aa12.3□□□□□ -0.44
CDC42BPA-203ENST00000366766 LNPEPQ9UIQ6 1025 aa12.3□□□□□ -0.44
CDC42BPA-203ENST00000366766 RAMP2O60895 175 aa12.3□□□□□ -0.44
CDC42BPA-203ENST00000366766 MLNP12872 115 aa12.3□□□□□ -0.44
CDC42BPA-203ENST00000366766 AMPD2Q01433 879 aa12.3□□□□□ -0.44
CDC42BPA-203ENST00000366766 PARP6Q2NL67 630 aa12.3□□□□□ -0.44
CDC42BPA-203ENST00000366766 ZNF786Q8N393 782 aa12.3□□□□□ -0.44
CDC42BPA-203ENST00000366766 ABHD8Q96I13 439 aa12.3□□□□□ -0.44
CDC42BPA-203ENST00000366766 PALMDQ9NP74 551 aa12.3□□□□□ -0.44
CDC42BPA-203ENST00000366766 RCOR3Q9P2K3 495 aaPredicted RBP12.3□□□□□ -0.44
CDC42BPA-203ENST00000366766 DDTLA6NHG4 134 aaPredicted RBP12.3□□□□□ -0.44
CDC42BPA-203ENST00000366766 CCDC159P0C7I6 412 aa12.3□□□□□ -0.44
CDC42BPA-203ENST00000366766 GSTA3Q16772 222 aa12.3□□□□□ -0.44
CDC42BPA-203ENST00000366766 SDE2Q6IQ49 451 aa12.3□□□□□ -0.44
CDC42BPA-203ENST00000366766 RETSATQ6NUM9 610 aa12.3□□□□□ -0.44
CDC42BPA-203ENST00000366766 FUKQ8N0W3 1084 aa12.3□□□□□ -0.44
CDC42BPA-203ENST00000366766 POP1Q99575 1024 aaKnown RBP12.3□□□□□ -0.44
CDC42BPA-203ENST00000366766 ELOVL6Q9H5J4 265 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms