RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 KPNB1Q14974 876 aaKnown RBP4.85□□□□□ -1.63
RNU6-560P-201ENST00000364007 SEC23BQ15437 767 aa4.85□□□□□ -1.63
RNU6-560P-201ENST00000364007 LRRC24Q50LG9 513 aa4.85□□□□□ -1.63
RNU6-560P-201ENST00000364007 SYT13Q7L8C5 426 aa4.85□□□□□ -1.63
RNU6-560P-201ENST00000364007 FTSJ3Q8IY81 847 aaKnown RBP4.85□□□□□ -1.63
RNU6-560P-201ENST00000364007 LAS2Q8IYD9 372 aa4.85□□□□□ -1.63
RNU6-560P-201ENST00000364007 SEMA6DQ8NFY4 1073 aa4.85□□□□□ -1.63
RNU6-560P-201ENST00000364007 OR6Y1Q8NGX8 325 aa4.85□□□□□ -1.63
RNU6-560P-201ENST00000364007 PNISRQ8TF01 805 aaKnown RBP4.85□□□□□ -1.63
RNU6-560P-201ENST00000364007 AFG1LQ8WV93 481 aa4.85□□□□□ -1.63
RNU6-560P-201ENST00000364007 TRIM63Q969Q1 353 aa4.85□□□□□ -1.63
RNU6-560P-201ENST00000364007 ASB2Q96Q27 587 aa4.85□□□□□ -1.63
RNU6-560P-201ENST00000364007 LIN7CQ9NUP9 197 aaKnown RBP4.85□□□□□ -1.63
RNU6-560P-201ENST00000364007 ASNSD1Q9NWL6 643 aa4.85□□□□□ -1.63
RNU6-560P-201ENST00000364007 C11orf21Q9P2W6 132 aa4.85□□□□□ -1.63
RNU6-560P-201ENST00000364007 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.85□□□□□ -1.63
RNU6-560P-201ENST00000364007 FEM1BQ9UK73 627 aa4.85□□□□□ -1.63
RNU6-560P-201ENST00000364007 RCE1Q9Y256 329 aa4.85□□□□□ -1.63
RNU6-560P-201ENST00000364007 COX11Q9Y6N1 276 aa4.85□□□□□ -1.63
RNU6-560P-201ENST00000364007 DGKBQ9Y6T7 804 aa4.85□□□□□ -1.63
RNU6-560P-201ENST00000364007 SPATA31A1Q5TZJ5 1347 aa4.85□□□□□ -1.63
RNU6-560P-201ENST00000364007 TBC1D3DA0A087WVF3 549 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 TBC1D3IA0A087WXS9 549 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 TBC1D3EA0A087X179 549 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 TBC1D3KA0A087X1G2 549 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 TBC1D3BA6NDS4 549 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 TBC1D3FA6NER0 549 aaPredicted RBP4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 FAM90A20PA6NIJ5 464 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 TTC34A8MYJ7 566 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 TBC1D3LB9A6J9 549 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 RRHO14718 337 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 HEXIM1O94992 359 aaKnown RBP4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 CYP3A4P08684 503 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 TBC1D3HP0C7X1 549 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 NDUFS1P28331 727 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 HOXD12P35452 270 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 IDUAP35475 653 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 PPFIA1Q13136 1202 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 PFKFB3Q16875 520 aaPredicted RBP4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 C4orf46Q504U0 113 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 CC2D1BQ5T0F9 858 aaKnown RBP4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 TBC1D3GQ6DHY5 549 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 TBC1D3CQ6IPX1 549 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 WDR93Q6P2C0 686 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 VSTM1Q6UX27 236 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 KIAA1324Q6UXG2 1013 aaKnown RBP4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 TFAP2DQ7Z6R9 452 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 TBC1D3Q8IZP1 549 aaPredicted RBP4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 CPT1BQ92523 772 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 DPF1Q92782 380 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 GOLGA1Q92805 767 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 CELF1Q92879 486 aaKnown RBP4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 HIC2Q96JB3 615 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 GPR78Q96P69 363 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 EFHD1Q9BUP0 239 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 ARHGAP39Q9C0H5 1083 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 NUAK2Q9H093 628 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 CHODLQ9H9P2 273 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 MLXIPLQ9NP71 852 aa4.84□□□□□ -1.63
RNU6-560P-201ENST00000364007 WIPF3A6NGB9 483 aa4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 TMEM232C9JQI7 657 aa4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 IRAK2O43187 625 aa4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 SLC3A2P08195 630 aaKnown RBP4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 CHRM5P08912 532 aaPredicted RBP4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 SLC8A1P32418 973 aa4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 AARSP49588 968 aaKnown RBP eCLIP4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 CDK7P50613 346 aa4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 ZNF84P51523 738 aa4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 SLC37A1P57057 533 aa4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 TAS2R50P59544 299 aa4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 SMAD1Q15797 465 aaKnown RBP4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 TMEM95Q3KNT9 176 aa4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 CERKLQ49MI3 558 aaPredicted RBP4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 TMEM63BQ5T3F8 832 aa4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 SYNE3Q6ZMZ3 975 aa4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 ZNF66Q6ZN08 573 aa4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 RFX8Q6ZV50 586 aa4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 RASGRP2Q7LDG7 609 aa4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 ZNF354CQ86Y25 554 aa4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 HERC6Q8IVU3 1022 aa4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 CPXCR1Q8N123 301 aa4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 C8orf58Q8NAV2 365 aa4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 HASPINQ8TF76 798 aa4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 C5orf34Q96MH7 638 aa4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 GATA5Q9BWX5 397 aaPredicted RBP4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 RMI1Q9H9A7 625 aa4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 PRDM16Q9HAZ2 1276 aa4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 NDUFAF4Q9P032 175 aa4.83□□□□□ -1.64
RNU6-560P-201ENST00000364007 LINC01548A6NM66 108 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 PRKCGP05129 697 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 RFPL3SP0C7P2 107 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 RXRAP19793 462 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 MPGP29372 298 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 RBM5P52756 815 aaKnown RBP eCLIP4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 RCAN1P53805 252 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 INHBEP58166 350 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 SHC2P98077 582 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 NHLH1Q02575 133 aa4.82□□□□□ -1.64
RNU6-560P-201ENST00000364007 TLE3Q04726 772 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms