RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 PODNQ7Z5L7 613 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 SLC9A9Q8IVB4 645 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 UNC5BQ8IZJ1 945 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 TNS4Q8IZW8 715 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 ABRAQ8N0Z2 381 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 LARGE2Q8N3Y3 721 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 MARVELD2Q8N4S9 558 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 TMEM35BQ8NCS4 154 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 DDX1Q92499 740 aaKnown RBP13.06□□□□□ -0.32
VAMP1-201ENST00000361716 MASTLQ96GX5 879 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 C7orf26Q96N11 449 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 RIT2Q99578 217 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 TRPC7Q9HCX4 862 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 SACM1LQ9NTJ5 587 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 SSX2IPQ9Y2D8 614 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 ASTN2O75129 1339 aaPredicted RBP13.05□□□□□ -0.32
VAMP1-201ENST00000361716 A0A1W2PPW3 197 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 SDR42E2A6NKP2 422 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 RGL2O15211 777 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 S100BP04271 92 aaPredicted RBP13.05□□□□□ -0.32
VAMP1-201ENST00000361716 CCDC130P13994 396 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 NDST2P52849 883 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 MYL6P60660 151 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 NME3Q13232 169 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 NR1D2Q14995 579 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 OR6B2Q6IFH4 312 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 TRMT10BQ6PF06 316 aaKnown RBP13.05□□□□□ -0.32
VAMP1-201ENST00000361716 C14orf80Q86SX3 495 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 FAM47BQ8NA70 645 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 CRYGNQ8WXF5 182 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 PPP1R10Q96QC0 940 aaKnown RBP13.05□□□□□ -0.32
VAMP1-201ENST00000361716 SMYD2Q9NRG4 433 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 RNF19AQ9NV58 838 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 UBE4BO95155 1302 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 UBR3Q6ZT12 1888 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 SAC3D1A6NKF1 404 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 GRIN3BO60391 1043 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 CCNE2O96020 404 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 BPGMP07738 259 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 UGT1A6P19224 532 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 UGT1A1P22309 533 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 UGT1A4P22310 534 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 UGT1A3P35503 534 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 UGT1A5P35504 534 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 GPC3P51654 580 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 MRPS5P82675 430 aaKnown RBP13.05□□□□□ -0.32
VAMP1-201ENST00000361716 FSTL1Q12841 308 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 SLC9A4Q6AI14 798 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 TTC33Q6PID6 262 aaPredicted RBP13.05□□□□□ -0.32
VAMP1-201ENST00000361716 CENPSQ8N2Z9 138 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 ATP6V1E2Q96A05 226 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 GCOM2Q9BZD3 368 aaPredicted RBP13.05□□□□□ -0.32
VAMP1-201ENST00000361716 AGO4Q9HCK5 861 aaKnown RBP13.05□□□□□ -0.32
VAMP1-201ENST00000361716 MYRFQ9Y2G1 1151 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 PCDHA10Q9Y5I2 948 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 SNCAIPQ9Y6H5 919 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 MYPNQ86TC9 1320 aa13.05□□□□□ -0.32
VAMP1-201ENST00000361716 hCG_1818297A0A087WSY0 165 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 INO80B-WBP1J3KQ70 363 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 CCNT2O60583 730 aaKnown RBP13.04□□□□□ -0.32
VAMP1-201ENST00000361716 PEX10O60683 326 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 CST3P01034 146 aaPredicted RBP13.04□□□□□ -0.32
VAMP1-201ENST00000361716 UNGP13051 313 aaPredicted RBP13.04□□□□□ -0.32
VAMP1-201ENST00000361716 EPHA3P29320 983 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 CLCN2P51788 898 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 NOMO3P69849 1222 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 GTF2BQ00403 316 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 TBCCQ15814 346 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 IL31Q6EBC2 164 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 BNC2Q6ZN30 1099 aaPredicted RBP13.04□□□□□ -0.32
VAMP1-201ENST00000361716 CROCCP3Q8IVE0 287 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 INO80BQ9C086 356 aaPredicted RBP13.04□□□□□ -0.32
VAMP1-201ENST00000361716 APOBEC3GQ9HC16 384 aaKnown RBP13.04□□□□□ -0.32
VAMP1-201ENST00000361716 SSU72Q9NP77 194 aaKnown RBP13.04□□□□□ -0.32
VAMP1-201ENST00000361716 KCND2Q9NZV8 630 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 TBC1D30Q9Y2I9 924 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 H3BNX3 289 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 SESN2P58004 480 aaPredicted RBP13.04□□□□□ -0.32
VAMP1-201ENST00000361716 XIAPP98170 497 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 PRKCEQ02156 737 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 FAM102AQ5T9C2 384 aaPredicted RBP13.04□□□□□ -0.32
VAMP1-201ENST00000361716 SLC2A7Q6PXP3 512 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 CHST15Q7LFX5 561 aaPredicted RBP13.04□□□□□ -0.32
VAMP1-201ENST00000361716 C10orf107Q8IVU9 208 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 AHI1Q8N157 1196 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 PCDH20Q8N6Y1 951 aaKnown RBP13.04□□□□□ -0.32
VAMP1-201ENST00000361716 ACTRT2Q8TDY3 377 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 MZB1Q8WU39 189 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 HPS1Q92902 700 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 C12orf43Q96C57 262 aaKnown RBP13.04□□□□□ -0.32
VAMP1-201ENST00000361716 RCN3Q96D15 328 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 NLRP4Q96MN2 994 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 NRDE2Q9H7Z3 1164 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 COQ10BQ9H8M1 238 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 TTLL3Q9Y4R7 772 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 MATN2O00339 956 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 ADAM23O75077 832 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 CLIC3O95833 236 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 MAP4P27816 1152 aaKnown RBP13.04□□□□□ -0.32
VAMP1-201ENST00000361716 HMOX2P30519 316 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms