RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 CDC42BPAQ5VT25 1732 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 ATN1P54259 1190 aaPredicted RBP13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 TRMT2AQ8IZ69 625 aaKnown RBP13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 TRMT13Q9NUP7 481 aaKnown RBP13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 TMCO1Q9UM00 188 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 GSTK1Q9Y2Q3 226 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 C5orf22Q49AR2 442 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 EIF3MQ7L2H7 374 aaKnown RBP13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 TRIM74Q86UV6 250 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 TRIM73Q86UV7 250 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 NSMCE2Q96MF7 247 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 RNF145Q96MT1 663 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 MTG1Q9BT17 334 aaPredicted RBP13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 ATP10BO94823 1461 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 SLC25A27O95847 323 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 PRKCBP05771 671 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 ADAM17P78536 824 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 SRBD1Q8N5C6 995 aaKnown RBP13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 TPD52L3Q96J77 140 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 PAFAH2Q99487 392 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 SEPT5Q99719 369 aaPredicted RBP13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 KIAA1257Q9ULG3 409 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 A0A087X0T9 212 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 NCF1BA6NI72 391 aaPredicted RBP13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 NCF1CA8MVU1 366 aaPredicted RBP13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 F5H5T6 163 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 EXTL3O43909 919 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 EYA4O95677 639 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 GH1P01241 217 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 RBP3P10745 1247 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 NCF1P14598 390 aaPredicted RBP13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 FAM220AQ7Z4H9 259 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 RP9Q8TA86 221 aaKnown RBP13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 EMC3Q9P0I2 261 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 PCDHB2Q9Y5E7 798 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 SAMD9Q5K651 1589 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 PSMD11O00231 422 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 TMEM253P0C7T8 217 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 LBPP18428 481 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 MCL1Q07820 350 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 SERAC1Q96JX3 654 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 YME1L1Q96TA2 773 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 SAR1AQ9NR31 198 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 RPS6KL1Q9Y6S9 549 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 SPHKAPQ2M3C7 1700 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 MAGEB16A2A368 324 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 LYNP07948 512 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 NR1H2P55055 460 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 RPL10AP62906 217 aaKnown RBP13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 BHLHB9Q6PI77 547 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 USP17L6PQ6QN14 398 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 PROSER1Q86XN7 944 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 CYP4F12Q9HCS2 524 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 CHORDC1Q9UHD1 332 aaPredicted RBP13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 CBX6O95503 412 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 MSH3P20585 1137 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 MYBPC2Q14324 1141 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 CRELD2Q6UXH1 353 aaPredicted RBP13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 C8orf59Q8N0T1 100 aaPredicted RBP13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 SLC9A7Q96T83 725 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 PCDH12Q9NPG4 1184 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 NINQ8N4C6 2090 aa13.5□□□□□ -0.25
SRGAP3-201ENST00000360413 CACNB2Q08289 660 aaPredicted RBP13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 OLFML2AQ68BL7 652 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 CYP2R1Q6VVX0 501 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 MTSS1LQ765P7 747 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 SLC13A5Q86YT5 568 aaPredicted RBP13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 SIRT2Q8IXJ6 389 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 NACC2Q96BF6 587 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 QRFPRQ96P65 431 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 TRIM9Q9C026 710 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 NUDT5Q9UKK9 219 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 ZNF232Q9UNY5 417 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 AK5Q9Y6K8 562 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 TCOF1Q13428 1488 aaKnown RBP13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 CCDC166P0CW27 439 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 BOLA3Q53S33 107 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 BROXQ5VW32 411 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 RNF149Q8NC42 400 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 UGT2B28Q9BY64 529 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 TMEM260Q9NX78 707 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 NCKIPSDQ9NZQ3 722 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 ARMCX1Q9P291 453 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 CORO2BQ9UQ03 480 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 UBDO15205 165 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 GMFBP60983 142 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 CBX3Q13185 183 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 STARD3Q14849 445 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 BHLHE22Q8NFJ8 381 aaPredicted RBP13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 FAM172AQ8WUF8 416 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 AHCYL2Q96HN2 611 aaKnown RBP13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 ANKZF1Q9H8Y5 726 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 RP1L1Q8IWN7 2480 aaPredicted RBP13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 FOXN3O00409 490 aaPredicted RBP13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 FCHO1O14526 889 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 POLR2LP62875 67 aaKnown RBP13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 C11orf63Q6NUN7 778 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 PALB2Q86YC2 1186 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 TBC1D10CQ8IV04 446 aa13.49□□□□□ -0.25
SRGAP3-201ENST00000360413 MRPS31Q92665 395 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms