RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 WNT10BO00744 389 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 PFDN1O60925 122 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 TNNC2P02585 160 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 PRKCBP05771 671 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 ITGA2BP08514 1039 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 COX4I1P13073 169 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 TYK2P29597 1187 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 HMGCS2P54868 508 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 CYTH1Q15438 398 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 PPP1R2P3Q6NXS1 205 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 PGM2L1Q6PCE3 622 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 AAGABQ6PD74 315 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 KCNT2Q6UVM3 1135 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 SDCCAG8Q86SQ7 713 aaPredicted RBP10.43□□□□□ -0.74
PTPRA-203ENST00000356147 ZSCAN18Q8TBC5 510 aaPredicted RBP10.43□□□□□ -0.74
PTPRA-203ENST00000356147 LGMNQ99538 433 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 C1orf21Q9H246 121 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 PNPLA8Q9NP80 782 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 COX16Q9P0S2 106 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 CENPFP49454 3210 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 OGTO15294 1046 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 DKC1O60832 514 aaKnown RBP eCLIP10.43□□□□□ -0.74
PTPRA-203ENST00000356147 KLHL2O95198 593 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 ASLP04424 464 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 PRKCGP05129 697 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 RALBP11234 206 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 ENO3P13929 434 aaPredicted RBP10.43□□□□□ -0.74
PTPRA-203ENST00000356147 XRCC1P18887 633 aaPredicted RBP10.43□□□□□ -0.74
PTPRA-203ENST00000356147 GPD2P43304 727 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 ZNF143P52747 638 aaPredicted RBP10.43□□□□□ -0.74
PTPRA-203ENST00000356147 IRF9Q00978 393 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 MYLK3Q32MK0 819 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 KLHDC10Q6PID8 442 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 PYROXD2Q8N2H3 581 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 FBXW8Q8N3Y1 598 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 RDM1Q8NG50 284 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 ZFP28Q8NHY6 868 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 GRIN3AQ8TCU5 1115 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 AGAP3Q96P47 875 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 TMPRSS4Q9NRS4 437 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 TBC1D30Q9Y2I9 924 aa10.43□□□□□ -0.74
PTPRA-203ENST00000356147 COL11A2P13942 1736 aaPredicted RBP10.43□□□□□ -0.74
PTPRA-203ENST00000356147 C2CD4BA6NLJ0 364 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 NOP56O00567 594 aaKnown RBP10.42□□□□□ -0.74
PTPRA-203ENST00000356147 HCRTO43612 131 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 DNAJA2O60884 412 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 CHRNGP07510 517 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 FAM200BP0CF97 657 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 ARSAP15289 507 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 TSHRP16473 764 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 FGFR3P22607 806 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 EPHA3P29320 983 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 L1CAMP32004 1257 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 GABRB2P47870 512 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 GALK1P51570 392 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 MAP7Q14244 749 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 MYBPC3Q14896 1274 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 NRF1Q16656 503 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 CCDC14Q49A88 953 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 WDR78Q5VTH9 848 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 PACS1Q6VY07 963 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 AMIGO2Q86SJ2 522 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 SNX32Q86XE0 403 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 C1orf127Q8N9H9 656 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 ACTRT2Q8TDY3 377 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 FNIP1Q8TF40 1166 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 CLEC4CQ8WTT0 213 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 CNKSR2Q8WXI2 1034 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 ANKRD36BP1Q96IX9 119 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 CDRT15Q96T59 188 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 PCYT2Q99447 389 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 ACO2Q99798 780 aaKnown RBP10.42□□□□□ -0.74
PTPRA-203ENST00000356147 CNPY3Q9BT09 278 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 MRPL4Q9BYD3 311 aaKnown RBP10.42□□□□□ -0.74
PTPRA-203ENST00000356147 DNAJB4Q9UDY4 337 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 CPSF3Q9UKF6 684 aaKnown RBP10.42□□□□□ -0.74
PTPRA-203ENST00000356147 SSX2IPQ9Y2D8 614 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 CRTAMO95727 393 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 HSPA4LO95757 839 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 PIGRP01833 764 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 SERPINE1P05121 402 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 SRGAP2BP0DMP2 458 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 CYP2F1P24903 491 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 THOP1P52888 689 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 CDKL1Q00532 357 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 KLF10Q13118 480 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 TMEM132BQ14DG7 1078 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 STILQ15468 1287 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 STYK1Q6J9G0 422 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 TP53INP2Q8IXH6 220 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 PQLC1Q8N2U9 271 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 MCRS1Q96EZ8 462 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 TMEM176AQ96HP8 235 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 FRMD8P1Q9BZ68 369 aaPredicted RBP10.42□□□□□ -0.74
PTPRA-203ENST00000356147 SEMA6AQ9H2E6 1030 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 ZDHHC7Q9NXF8 308 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 TSPAN16Q9UKR8 245 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 PHF24Q9UPV7 400 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 PCDHA11Q9Y5I1 949 aa10.42□□□□□ -0.74
PTPRA-203ENST00000356147 AP4B1Q9Y6B7 739 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms