RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 BTLAQ7Z6A9 289 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 AMIGO3Q86WK7 504 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.17■□□□□ 0.18
RTN3-205ENST00000356000 TXNDC15Q96J42 360 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 SLC4A9Q96Q91 983 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 RTKNQ9BST9 563 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 GLT8D2Q9H1C3 349 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 ZHX3Q9H4I2 956 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 NARFQ9UHQ1 456 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 ZSCAN5DPP0CG00 497 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 GPS1Q13098 491 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 UBE2SQ16763 222 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 PGS1Q32NB8 556 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 FAM117BQ6P1L5 589 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 RALGPS2Q86X27 583 aaPredicted RBP16.16■□□□□ 0.18
RTN3-205ENST00000356000 DCPSQ96C86 337 aaKnown RBP16.16■□□□□ 0.18
RTN3-205ENST00000356000 PLLPQ9Y342 182 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 KDM3AQ9Y4C1 1321 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 LOC100653049A0A140TA62 436 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 CCDC195A0A1B0GUA6 201 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 RNASEH2AO75792 299 aaKnown RBP16.16■□□□□ 0.18
RTN3-205ENST00000356000 KRT34O76011 436 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 MYL4P12829 197 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 DPEP1P16444 411 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 GRK2P25098 689 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 RPL10P27635 214 aaKnown RBP16.16■□□□□ 0.18
RTN3-205ENST00000356000 MAP4P27816 1152 aaKnown RBP16.16■□□□□ 0.18
RTN3-205ENST00000356000 ARSEP51690 589 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 PHC1P78364 1004 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 HIF1AQ16665 826 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 CBWD6Q4V339 395 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 CBWD3Q5JTY5 395 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 CBWD5Q5RIA9 395 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 DSG4Q86SJ6 1040 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 ZNF598Q86UK7 904 aaKnown RBP16.16■□□□□ 0.18
RTN3-205ENST00000356000 AKAP14Q86UN6 197 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 NUDCD3Q8IVD9 361 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 FAM47BQ8NA70 645 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 FAM89AQ96GI7 184 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 SH3YL1Q96HL8 342 aaPredicted RBP16.16■□□□□ 0.18
RTN3-205ENST00000356000 CLSTN3Q9BQT9 956 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 ZBED2Q9BTP6 218 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 RPAP3Q9H6T3 665 aaPredicted RBP16.16■□□□□ 0.18
RTN3-205ENST00000356000 SLC38A10Q9HBR0 1119 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 KLQ9UEF7 1012 aa16.16■□□□□ 0.18
RTN3-205ENST00000356000 HAT1O14929 419 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 NOL3O60936 208 aaKnown RBP16.15■□□□□ 0.18
RTN3-205ENST00000356000 ENTPD3O75355 529 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 TDP2O95551 362 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 COX4I1P13073 169 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 PPP2R2BQ00005 443 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 NME3Q13232 169 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 BMT2Q1RMZ1 405 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 LRIT3Q3SXY7 679 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 SLC10A5Q5PT55 438 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 C16orf46Q6P387 395 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 MYO1HQ8N1T3 1032 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 PNMA1Q8ND90 353 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 SLC29A1Q99808 456 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 RIOK1Q9BRS2 568 aaKnown RBP16.15■□□□□ 0.18
RTN3-205ENST00000356000 GREM2Q9H772 168 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 NEK6Q9HC98 313 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 LRP2BPQ9P2M1 347 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 VPS28Q9UK41 221 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 PACSIN3Q9UKS6 424 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 BCS1LQ9Y276 419 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 AP3B1O00203 1094 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 ACOX3O15254 700 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 EDIL3O43854 480 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 B4GALT4O60513 344 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 FAM155BO75949 473 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 XRCC1P18887 633 aaPredicted RBP16.15■□□□□ 0.18
RTN3-205ENST00000356000 OPRL1P41146 370 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 GRIA3P42263 894 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 C19orf57Q0VDD7 668 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 TNIP2Q8NFZ5 429 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 APOL6Q9BWW8 343 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 AVENQ9NQS1 362 aaPredicted RBP16.15■□□□□ 0.18
RTN3-205ENST00000356000 PCDHA12Q9UN75 941 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 ARHGEF35A5YM69 484 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 CLIC2O15247 247 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 KRT18P05783 430 aaKnown RBP16.15■□□□□ 0.18
RTN3-205ENST00000356000 TMBIM6P55061 237 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 NFE2Q16621 373 aaPredicted RBP16.15■□□□□ 0.18
RTN3-205ENST00000356000 HACE1Q8IYU2 909 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 BHLHE22Q8NFJ8 381 aaPredicted RBP16.15■□□□□ 0.18
RTN3-205ENST00000356000 SERPINA10Q9UK55 444 aa16.15■□□□□ 0.18
RTN3-205ENST00000356000 AREL1O15033 823 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 ZMPSTE24O75844 475 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 NAGAP17050 411 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 CTRB1P17538 263 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 PSMC2P35998 433 aaKnown RBP16.14■□□□□ 0.17
RTN3-205ENST00000356000 IFITM3Q01628 133 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 PTP4A2Q12974 167 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 CYP4A22Q5TCH4 519 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 PDPK2PQ6A1A2 396 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 CTRB2Q6GPI1 263 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 EPS8L1Q8TE68 723 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 SLC44A1Q8WWI5 657 aa16.14■□□□□ 0.17
RTN3-205ENST00000356000 WDR83Q9BRX9 315 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms