RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 SNX27Q96L92 541 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 NUDT16L1Q9BRJ7 211 aaKnown RBP8.39□□□□□ -1.07
COMMD9-202ENST00000355500 RNF208Q9H0X6 261 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 ABHD16BQ9H3Z7 469 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 PDZD7Q9H5P4 517 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 LIN28AQ9H9Z2 209 aaKnown RBP8.39□□□□□ -1.07
COMMD9-202ENST00000355500 TSR3Q9UJK0 312 aaKnown RBP8.39□□□□□ -1.07
COMMD9-202ENST00000355500 GRID1Q9ULK0 1009 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 SIGLEC16A6NMB1 481 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 E2F3O00716 465 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 SOCS5O75159 536 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 POP4O95707 220 aaKnown RBP8.39□□□□□ -1.07
COMMD9-202ENST00000355500 AGTP01019 485 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 ATP5BP06576 529 aaKnown RBP8.39□□□□□ -1.07
COMMD9-202ENST00000355500 TSHRP16473 764 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 MARCKSL1P49006 195 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 IRAK1P51617 712 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 KCNC4Q03721 635 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 CBX3Q13185 183 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 ITGA7Q13683 1181 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 STK11Q15831 433 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 TMEM259Q4ZIN3 620 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 SGO2Q562F6 1265 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 ZBTB41Q5SVQ8 909 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 PPP1R21Q6ZMI0 780 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 RIBC1Q8N443 379 aaPredicted RBP8.39□□□□□ -1.07
COMMD9-202ENST00000355500 GDAP1Q8TB36 358 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 DEPDC7Q96QD5 511 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 NR1H4Q96RI1 486 aaPredicted RBP8.39□□□□□ -1.07
COMMD9-202ENST00000355500 C16orf70Q9BSU1 422 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 UNC93B1Q9H1C4 597 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 CCDC134Q9H6E4 229 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 ATP13A1Q9HD20 1204 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 NEUROD4Q9HD90 331 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 PCDHGB5Q9Y5G0 923 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 MCM3APO60318 1980 aa8.39□□□□□ -1.07
COMMD9-202ENST00000355500 A8MVJ9 347 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 TYRP1P17643 537 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 RPL21P46778 160 aaKnown RBP8.38□□□□□ -1.07
COMMD9-202ENST00000355500 SULT1E1P49888 294 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 DNA2P51530 1060 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 DHX9Q08211 1270 aaKnown RBP8.38□□□□□ -1.07
COMMD9-202ENST00000355500 DRP2Q13474 957 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 ZNF667Q5HYK9 610 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 PPP2R2DQ66LE6 453 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 SLC6A19Q695T7 634 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 CNSTQ6PJW8 725 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 XKR5Q6UX68 686 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 CCDC121Q6ZUS5 278 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 MAMDC2Q7Z304 686 aaPredicted RBP8.38□□□□□ -1.07
COMMD9-202ENST00000355500 TRIM50Q86XT4 487 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 DNAAF5Q86Y56 855 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 RHPN2Q8IUC4 686 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 ZBTB8BQ8NAP8 495 aaPredicted RBP8.38□□□□□ -1.07
COMMD9-202ENST00000355500 TTC13Q8NBP0 860 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 RNF139Q8WU17 664 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 POF1BQ8WVV4 589 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 NKD2Q969F2 451 aaPredicted RBP8.38□□□□□ -1.07
COMMD9-202ENST00000355500 C18orf8Q96DM3 657 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 EPB41L4BQ9H329 900 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 CLK4Q9HAZ1 481 aaKnown RBP8.38□□□□□ -1.07
COMMD9-202ENST00000355500 FETUBQ9UGM5 382 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 DMTF1Q9Y222 760 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 NR2E1Q9Y466 385 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 MBLAC1A4D2B0 266 aaPredicted RBP8.38□□□□□ -1.07
COMMD9-202ENST00000355500 DNM1LO00429 736 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 TREHO43280 583 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 ATMINO43313 823 aaPredicted RBP8.38□□□□□ -1.07
COMMD9-202ENST00000355500 RIPK2O43353 540 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 CILPO75339 1184 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 TJP3O95049 919 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 PGK2P07205 417 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 KRT7P08729 469 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 ATF4P18848 351 aaPredicted RBP8.38□□□□□ -1.07
COMMD9-202ENST00000355500 ADORA2AP29274 412 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 PMLP29590 882 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 GUCY2FP51841 1108 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 BLVRAP53004 296 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 CALCOCO2Q13137 446 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 DENND2CQ68D51 928 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 TWF2Q6IBS0 349 aaKnown RBP8.38□□□□□ -1.07
COMMD9-202ENST00000355500 DNAJC24Q6P3W2 148 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 PLEKHH3Q7Z736 793 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 YTHDF3Q7Z739 585 aaKnown RBP8.38□□□□□ -1.07
COMMD9-202ENST00000355500 GATAD2AQ86YP4 633 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 ZDHHC17Q8IUH5 632 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 THNSL1Q8IYQ7 743 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 ZDHHC14Q8IZN3 488 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 SIX5Q8N196 739 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 LRRC52Q8N7C0 313 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 PLPP7Q8NBV4 271 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 TRIM51Q9BSJ1 452 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 EPN3Q9H201 632 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 OBP2AQ9NY56 170 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 SLC12A6Q9UHW9 1150 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 GABRQQ9UN88 632 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 ACTL7BQ9Y614 415 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 DOCK3Q8IZD9 2030 aa8.38□□□□□ -1.07
COMMD9-202ENST00000355500 COL4A4P53420 1690 aaPredicted RBP8.38□□□□□ -1.07
COMMD9-202ENST00000355500 SMIM35A0A1B0GVV1 85 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms