RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 ATG4CQ96DT6 458 aa15.22■□□□□ 0.03
LMX1B-201ENST00000355497 DCUN1D5Q9BTE7 237 aa15.22■□□□□ 0.03
LMX1B-201ENST00000355497 C9orf16Q9BUW7 83 aa15.22■□□□□ 0.03
LMX1B-201ENST00000355497 ARHGAP28Q9P2N2 729 aa15.22■□□□□ 0.03
LMX1B-201ENST00000355497 UBA2Q9UBT2 640 aaPredicted RBP15.22■□□□□ 0.03
LMX1B-201ENST00000355497 FDPSP14324 419 aaKnown RBP15.22■□□□□ 0.03
LMX1B-201ENST00000355497 SPANXN3Q5MJ09 141 aa15.22■□□□□ 0.03
LMX1B-201ENST00000355497 ILDR2Q71H61 639 aa15.22■□□□□ 0.03
LMX1B-201ENST00000355497 PCDH9Q9HC56 1237 aa15.22■□□□□ 0.03
LMX1B-201ENST00000355497 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.22■□□□□ 0.03
LMX1B-201ENST00000355497 HOXA2O43364 376 aa15.22■□□□□ 0.03
LMX1B-201ENST00000355497 SYNCRIPO60506 623 aaKnown RBP15.22■□□□□ 0.03
LMX1B-201ENST00000355497 SEC22BO75396 215 aa15.22■□□□□ 0.03
LMX1B-201ENST00000355497 ICAM1P05362 532 aa15.22■□□□□ 0.03
LMX1B-201ENST00000355497 TKTP29401 623 aaKnown RBP15.22■□□□□ 0.03
LMX1B-201ENST00000355497 MAPKAPK2P49137 400 aa15.22■□□□□ 0.03
LMX1B-201ENST00000355497 CCDC157Q569K6 752 aa15.22■□□□□ 0.03
LMX1B-201ENST00000355497 PCNX4Q63HM2 1172 aa15.22■□□□□ 0.03
LMX1B-201ENST00000355497 OR56A4Q8NGH8 313 aa15.22■□□□□ 0.03
LMX1B-201ENST00000355497 APOPT1Q96IL0 206 aa15.22■□□□□ 0.03
LMX1B-201ENST00000355497 RNF145Q96MT1 663 aa15.22■□□□□ 0.03
LMX1B-201ENST00000355497 CDK5RAP1Q96SZ6 601 aaKnown RBP15.22■□□□□ 0.03
LMX1B-201ENST00000355497 CPNE1Q99829 537 aa15.22■□□□□ 0.03
LMX1B-201ENST00000355497 SENP2Q9HC62 589 aa15.22■□□□□ 0.03
LMX1B-201ENST00000355497 MID1IP1Q9NPA3 183 aa15.22■□□□□ 0.03
LMX1B-201ENST00000355497 MED14O60244 1454 aa15.22■□□□□ 0.03
LMX1B-201ENST00000355497 CD3EAPO15446 510 aaKnown RBP15.21■□□□□ 0.03
LMX1B-201ENST00000355497 RIPK2O43353 540 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 MT-CO1P00395 513 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 WARSP23381 471 aaKnown RBP15.21■□□□□ 0.03
LMX1B-201ENST00000355497 PUDPQ08623 228 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 ERMARDQ5T6L9 678 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 CPB2Q96IY4 423 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 ATAD3AQ9NVI7 634 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 PRKAG3Q9UGI9 489 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 DDX20Q9UHI6 824 aaKnown RBP15.21■□□□□ 0.03
LMX1B-201ENST00000355497 MRASO14807 208 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 PTPN3P26045 913 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 PPIDQ08752 370 aaKnown RBP15.21■□□□□ 0.03
LMX1B-201ENST00000355497 KCNMB4Q86W47 210 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 FBXO25Q8TCJ0 367 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 TMC2Q8TDI7 906 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 THAP1Q9NVV9 213 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 UBP1Q9NZI7 540 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 BTBD7Q9P203 1132 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 DUSP10Q9Y6W6 482 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 BCLAF3A2AJT9 711 aaKnown RBP15.21■□□□□ 0.03
LMX1B-201ENST00000355497 ACADMP11310 421 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 RRM1P23921 792 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 EPHB3P54753 998 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 CDH17Q12864 832 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 CBWD3Q5JTY5 395 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 CBWD5Q5RIA9 395 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 TRMT11Q7Z4G4 463 aaKnown RBP15.21■□□□□ 0.03
LMX1B-201ENST00000355497 RXFP2Q8WXD0 754 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 CENPIQ92674 756 aaPredicted RBP15.21■□□□□ 0.03
LMX1B-201ENST00000355497 MYLK2Q9H1R3 596 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 GGA3Q9NZ52 723 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 WDR27A2RRH5 827 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 TBKBP1A7MCY6 615 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 ATP5BP06576 529 aaKnown RBP15.21■□□□□ 0.03
LMX1B-201ENST00000355497 ANXA6P08133 673 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 HPCAL1P37235 193 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 SCNN1BP51168 640 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 KLHL12Q53G59 568 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 HLA-DQA1Q5Y7H0 255 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 KIAA0408Q6ZU52 694 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 S100A13Q99584 98 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 DDX18Q9NVP1 670 aaKnown RBP15.21■□□□□ 0.03
LMX1B-201ENST00000355497 GALNT8Q9NY28 637 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 CHKBQ9Y259 395 aa15.21■□□□□ 0.03
LMX1B-201ENST00000355497 CES2O00748 559 aa15.21■□□□□ 0.02
LMX1B-201ENST00000355497 TBC1D12O60347 775 aa15.21■□□□□ 0.02
LMX1B-201ENST00000355497 MED24O75448 989 aa15.21■□□□□ 0.02
LMX1B-201ENST00000355497 ETS1P14921 441 aa15.21■□□□□ 0.02
LMX1B-201ENST00000355497 ITGB6P18564 788 aa15.21■□□□□ 0.02
LMX1B-201ENST00000355497 PRR5LQ6MZQ0 368 aa15.21■□□□□ 0.02
LMX1B-201ENST00000355497 SLC47A2Q86VL8 602 aa15.21■□□□□ 0.02
LMX1B-201ENST00000355497 L2HGDHQ9H9P8 463 aa15.21■□□□□ 0.02
LMX1B-201ENST00000355497 GPRC5CQ9NQ84 441 aa15.21■□□□□ 0.02
LMX1B-201ENST00000355497 PCDHGA4Q9Y5G9 962 aa15.21■□□□□ 0.02
LMX1B-201ENST00000355497 FCHO1O14526 889 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 CKBP12277 381 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 POU6F1Q14863 301 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 NDUFAF6Q330K2 333 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 MZT2AQ6P582 158 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 STK32CQ86UX6 486 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 ATXN2LQ8WWM7 1075 aaKnown RBP15.2■□□□□ 0.02
LMX1B-201ENST00000355497 CYP3A43Q9HB55 503 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 OR6A2O95222 327 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 FGFR1P11362 822 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 NUMBP49757 651 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 CYP24A1Q07973 514 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 GNA13Q14344 377 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 MMADHCQ9H3L0 296 aaPredicted RBP15.2■□□□□ 0.02
LMX1B-201ENST00000355497 SH3GLB1Q9Y371 365 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 SMIM22K7EJ46 135 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 NAIF1Q69YI7 327 aaPredicted RBP15.2■□□□□ 0.02
LMX1B-201ENST00000355497 LRRC74BQ6ZQY2 392 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 STARD8Q92502 1023 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms