RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 PRPF19Q9UMS4 504 aaKnown RBP13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 SF3B1O75533 1304 aaKnown RBP eCLIP13.01□□□□□ -0.334e-6■■■■■ 38.3
SYNCRIP-201ENST00000355238 FAM237BA0A1B0GVD1 139 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 TMEM114B3SHH9 223 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 PNPLA4P41247 253 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 RPS7P62081 194 aaKnown RBP13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 VEPH1Q14D04 833 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 DPP10Q8N608 796 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 SMARCAD1Q9H4L7 1026 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 GLI2P10070 1586 aa13.01□□□□□ -0.33
SYNCRIP-201ENST00000355238 MYL12AP19105 171 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 FGFR3P22607 806 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 TWF1Q12792 350 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 NTRK3Q16288 839 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 LIN52Q52LA3 116 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 ZCCHC23Q6ZST2 131 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 KIAA0408Q6ZU52 694 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 ADCK2Q7Z695 626 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 MYO1HQ8N1T3 1032 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 ZNF276Q8N554 614 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 TARS2Q9BW92 718 aaKnown RBP13□□□□□ -0.33
SYNCRIP-201ENST00000355238 WDCPQ9H6R7 721 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 TMEM165Q9HC07 324 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 HPS4Q9NQG7 708 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 CIDEBQ9UHD4 219 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 CRLS1Q9UJA2 301 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 F9P00740 461 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 ALOX15P16050 662 aaPredicted RBP13□□□□□ -0.33
SYNCRIP-201ENST00000355238 TKFCQ3LXA3 575 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 ZNF720Q7Z2F6 126 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 C11orf74Q86VG3 221 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 NARS2Q96I59 477 aaKnown RBP13□□□□□ -0.33
SYNCRIP-201ENST00000355238 CGRRF1Q99675 332 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 RPRD1BQ9NQG5 326 aaKnown RBP13□□□□□ -0.33
SYNCRIP-201ENST00000355238 FBXO28Q9NVF7 368 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 AP4E1Q9UPM8 1137 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 PIN4Q9Y237 131 aaKnown RBP13□□□□□ -0.33
SYNCRIP-201ENST00000355238 ABCA8O94911 1581 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 WARSP23381 471 aaKnown RBP13□□□□□ -0.33
SYNCRIP-201ENST00000355238 QPRTQ15274 297 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 SDE2Q6IQ49 451 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 PSMA8Q8TAA3 256 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 RBM46Q8TBY0 533 aaKnown RBP13□□□□□ -0.33
SYNCRIP-201ENST00000355238 MAGEE2Q8TD90 523 aaPredicted RBP13□□□□□ -0.33
SYNCRIP-201ENST00000355238 COX4I2Q96KJ9 171 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 ZMYM2Q9UBW7 1377 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 MATN2O00339 956 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 CASP5P51878 434 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 NEK3P51956 506 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 AMPD2Q01433 879 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 ARHGEF7Q14155 803 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 MZT2AQ6P582 158 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 TMC7Q7Z402 723 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 EPHX4Q8IUS5 362 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 LRRC71Q8N4P6 559 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 EMC1Q8N766 993 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 LPAR1Q92633 364 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 ART4Q93070 314 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 CAMKK2Q96RR4 588 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 NMRAL1Q9HBL8 299 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 ZNF624Q9P2J8 865 aaPredicted RBP13□□□□□ -0.33
SYNCRIP-201ENST00000355238 KDM6AO15550 1401 aaPredicted RBP13□□□□□ -0.33
SYNCRIP-201ENST00000355238 RGSL1A5PLK6 1076 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 NCF1BA6NI72 391 aaPredicted RBP13□□□□□ -0.33
SYNCRIP-201ENST00000355238 NCF1CA8MVU1 366 aaPredicted RBP13□□□□□ -0.33
SYNCRIP-201ENST00000355238 NCF1P14598 390 aaPredicted RBP13□□□□□ -0.33
SYNCRIP-201ENST00000355238 SP100P23497 879 aaPredicted RBP13□□□□□ -0.33
SYNCRIP-201ENST00000355238 MZF1P28698 734 aaPredicted RBP13□□□□□ -0.33
SYNCRIP-201ENST00000355238 INO80DQ53TQ3 878 aaPredicted RBP13□□□□□ -0.33
SYNCRIP-201ENST00000355238 GPR107Q5VW38 600 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 ISLR2Q6UXK2 745 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 ARL10Q8N8L6 244 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 BLOC1S5Q8TDH9 187 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 TBCBQ99426 244 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 SLC38A7Q9NVC3 462 aa13□□□□□ -0.33
SYNCRIP-201ENST00000355238 ASB14A6NK59 587 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 MAP3K6O95382 1288 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 SLC2A3P11169 496 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 DGCR6Q14129 220 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 DENND5AQ6IQ26 1287 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 FAM126BQ8IXS8 530 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 KATNAL2Q8IYT4 538 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 RP9Q8TA86 221 aaKnown RBP12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 CBWD1Q9BRT8 395 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 MTG1Q9BT17 334 aaPredicted RBP12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 PHACTR1Q9C0D0 580 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 GSTK1Q9Y2Q3 226 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 FAM237AA0A1B0GTK4 181 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 BTN3A3O00478 584 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 CPSF4O95639 269 aaKnown RBP12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 PRKCIP41743 596 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 STAT5AP42229 794 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 GALK1P51570 392 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 CBX3Q13185 183 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 KCNMB4Q86W47 210 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 AADATQ8N5Z0 425 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 HPS1Q92902 700 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 MUC3BQ9H195 1237 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 ING4Q9UNL4 249 aa12.99□□□□□ -0.33
SYNCRIP-201ENST00000355238 SIK3Q9Y2K2 1263 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms