RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 FAM155BO75949 473 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 ITGAVP06756 1048 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 SRGAP2BP0DMP2 458 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 POLR2BP30876 1174 aaKnown RBP9.66□□□□□ -0.86
SMG6-202ENST00000354901 ELK3P41970 407 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 GJC2Q5T442 439 aaPredicted RBP9.66□□□□□ -0.86
SMG6-202ENST00000354901 ATF7IP2Q5U623 682 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 ARID3BQ8IVW6 561 aaPredicted RBP9.66□□□□□ -0.86
SMG6-202ENST00000354901 KCNN1Q92952 543 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 NKD2Q969F2 451 aaPredicted RBP9.66□□□□□ -0.86
SMG6-202ENST00000354901 PIWIL1Q96J94 861 aaKnown RBP9.66□□□□□ -0.86
SMG6-202ENST00000354901 C12orf42Q96LP6 360 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 PRICKLE1Q96MT3 831 aaPredicted RBP9.66□□□□□ -0.86
SMG6-202ENST00000354901 SDCBP2Q9H190 292 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 MANSC1Q9H8J5 431 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 FBXO9Q9UK97 447 aaPredicted RBP9.66□□□□□ -0.86
SMG6-202ENST00000354901 GINS2Q9Y248 185 aa9.66□□□□□ -0.86
SMG6-202ENST00000354901 ARID2Q68CP9 1835 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 J3QRK9 145 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 MCF2LO15068 1137 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 KDM1AO60341 852 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 MAFO75444 373 aaPredicted RBP9.65□□□□□ -0.86
SMG6-202ENST00000354901 CRABP2P29373 138 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 PHBP35232 272 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 PCYT1AP49585 367 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 OAZ1P54368 228 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 SLC25A11Q02978 314 aaKnown RBP9.65□□□□□ -0.86
SMG6-202ENST00000354901 HIC1Q14526 733 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 TRMT5Q32P41 509 aaKnown RBP9.65□□□□□ -0.86
SMG6-202ENST00000354901 RALGPS1Q5JS13 557 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 C6orf52Q5T4I8 152 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 OR6B2Q6IFH4 312 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 FBXL8Q96CD0 374 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 KLRG1Q96E93 195 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 OXNAD1Q96HP4 312 aaPredicted RBP9.65□□□□□ -0.86
SMG6-202ENST00000354901 CEP295NLQ96MC4 621 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 FAM111AQ96PZ2 611 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 CCT7Q99832 543 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 NIFKQ9BYG3 293 aaKnown RBP9.65□□□□□ -0.86
SMG6-202ENST00000354901 FOXP3Q9BZS1 431 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 XYLT2Q9H1B5 865 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 TMEM134Q9H6X4 195 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 NGRNQ9NPE2 291 aaKnown RBP9.65□□□□□ -0.86
SMG6-202ENST00000354901 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.65□□□□□ -0.86
SMG6-202ENST00000354901 SMG5Q9UPR3 1016 aaKnown RBP9.65□□□□□ -0.86
SMG6-202ENST00000354901 DRG1Q9Y295 367 aaKnown RBP9.65□□□□□ -0.86
SMG6-202ENST00000354901 EVPLQ92817 2033 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 SBF1O95248 1867 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 DCAF8L1A6NGE4 600 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 A8MXQ7 604 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 TRAFD1O14545 582 aaPredicted RBP9.65□□□□□ -0.86
SMG6-202ENST00000354901 ATG7O95352 703 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 LSM8O95777 96 aaKnown RBP9.65□□□□□ -0.86
SMG6-202ENST00000354901 KRT7P08729 469 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 RARBP10826 455 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 CDK16Q00536 496 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 TLR1Q15399 786 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 TARBP2Q15633 366 aaKnown RBP9.65□□□□□ -0.86
SMG6-202ENST00000354901 LRRC38Q5VT99 294 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 ZPBP2Q6X784 338 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 RELL1Q8IUW5 271 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 FBXO16Q8IX29 292 aaPredicted RBP9.65□□□□□ -0.86
SMG6-202ENST00000354901 NUP93Q8N1F7 819 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 UBR7Q8N806 425 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.65□□□□□ -0.86
SMG6-202ENST00000354901 DIS3LQ8TF46 1054 aaKnown RBP9.65□□□□□ -0.86
SMG6-202ENST00000354901 CPB2Q96IY4 423 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 ADPGKQ9BRR6 497 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 TRIM56Q9BRZ2 755 aaKnown RBP9.65□□□□□ -0.86
SMG6-202ENST00000354901 CAAP1Q9H8G2 361 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 RPF1Q9H9Y2 349 aaKnown RBP9.65□□□□□ -0.86
SMG6-202ENST00000354901 DDX43Q9NXZ2 648 aaKnown RBP9.65□□□□□ -0.86
SMG6-202ENST00000354901 CPSF3Q9UKF6 684 aaKnown RBP9.65□□□□□ -0.86
SMG6-202ENST00000354901 USP18Q9UMW8 372 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 ADAMTS5Q9UNA0 930 aa9.65□□□□□ -0.86
SMG6-202ENST00000354901 MYO18AQ92614 2054 aaKnown RBP9.65□□□□□ -0.86
SMG6-202ENST00000354901 C3orf70A6NLC5 250 aaPredicted RBP9.65□□□□□ -0.87
SMG6-202ENST00000354901 STRNO43815 780 aa9.65□□□□□ -0.87
SMG6-202ENST00000354901 TYROBPO43914 113 aa9.65□□□□□ -0.87
SMG6-202ENST00000354901 FAM189A1O60320 539 aa9.65□□□□□ -0.87
SMG6-202ENST00000354901 SERPINB7O75635 380 aa9.65□□□□□ -0.87
SMG6-202ENST00000354901 MT-ND3P03897 115 aa9.65□□□□□ -0.87
SMG6-202ENST00000354901 EFNA5P52803 228 aa9.65□□□□□ -0.87
SMG6-202ENST00000354901 YWHAEP62258 255 aaKnown RBP9.65□□□□□ -0.87
SMG6-202ENST00000354901 CARTPTQ16568 116 aa9.65□□□□□ -0.87
SMG6-202ENST00000354901 TLE6Q9H808 572 aa9.65□□□□□ -0.87
SMG6-202ENST00000354901 TBC1D23Q9NUY8 699 aa9.65□□□□□ -0.87
SMG6-202ENST00000354901 STRIP2Q9ULQ0 834 aa9.65□□□□□ -0.87
SMG6-202ENST00000354901 TMED5Q9Y3A6 229 aa9.65□□□□□ -0.87
SMG6-202ENST00000354901 A0A1W2PQ67 120 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 KBTBD13C9JR72 458 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 TMX2-CTNND1H3BSU7 103 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 C6orf222P0C671 652 aaPredicted RBP9.64□□□□□ -0.87
SMG6-202ENST00000354901 SMIM18P0DKX4 95 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 FAAP100Q0VG06 881 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 PTK7Q13308 1070 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 DRICH1Q6PGQ1 229 aaPredicted RBP9.64□□□□□ -0.87
SMG6-202ENST00000354901 PPM1NQ8N819 430 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 C1orf127Q8N9H9 656 aa9.64□□□□□ -0.87
SMG6-202ENST00000354901 USP33Q8TEY7 942 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms