RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 COL20A1Q9P218 1284 aa11.15□□□□□ -0.63
SND1-201ENST00000354725 HGSO14964 777 aaPredicted RBP11.14□□□□□ -0.63
SND1-201ENST00000354725 CYP26A1O43174 497 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 ABCB1P08183 1280 aaPredicted RBP11.14□□□□□ -0.63
SND1-201ENST00000354725 HOXC6P09630 235 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 MLLT3P42568 568 aaPredicted RBP11.14□□□□□ -0.63
SND1-201ENST00000354725 KCNJ1P48048 391 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 IFNAR2P48551 515 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 PCYT1AP49585 367 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 SLC12A2P55011 1212 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 BASP1P80723 227 aaKnown RBP11.14□□□□□ -0.63
SND1-201ENST00000354725 SP3Q02447 781 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 TJAP1Q5JTD0 557 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 FYB2Q5VWT5 728 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 ZNF598Q86UK7 904 aaKnown RBP11.14□□□□□ -0.63
SND1-201ENST00000354725 CLVS1Q8IUQ0 354 aaPredicted RBP11.14□□□□□ -0.63
SND1-201ENST00000354725 CARNMT1Q8N4J0 409 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 TMEM161BQ8NDZ6 487 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 TOR1AIP2Q8NFQ8 470 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 EXD1Q8NHP7 514 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 AGO4Q9HCK5 861 aaKnown RBP11.14□□□□□ -0.63
SND1-201ENST00000354725 ACP6Q9NPH0 428 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 CYLDQ9NQC7 956 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 CHST7Q9NS84 486 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 FGFR1OP2Q9NVK5 253 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.14□□□□□ -0.63
SND1-201ENST00000354725 PFDN6O15212 129 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 ZC3H11AO75152 810 aaKnown RBP eCLIP11.14□□□□□ -0.632e-6■■■□□ 15
SND1-201ENST00000354725 KRT36O76013 467 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 CHEK2O96017 543 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 PIM1P11309 404 aaPredicted RBP11.14□□□□□ -0.63
SND1-201ENST00000354725 SLC1A1P43005 524 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 HSPA14Q0VDF9 509 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 SEMA3AQ14563 771 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 CFAP161Q6P656 301 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 DNAJB8Q8NHS0 232 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 HCAR2Q8TDS4 363 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 ARMC7Q9H6L4 198 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 TRNAU1APQ9NX07 287 aaKnown RBP11.14□□□□□ -0.63
SND1-201ENST00000354725 ZNF212Q9UDV6 495 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 KLHL3Q9UH77 587 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 CNTN6Q9UQ52 1028 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 CCDC160A6NGH7 325 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 CLDN3O15551 220 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 PRPF4O43172 522 aaKnown RBP eCLIP11.14□□□□□ -0.63
SND1-201ENST00000354725 STBD1O95210 358 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 PCSK6P29122 969 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 ZNF76P36508 570 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 MFAP3P55082 362 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 SEC13P55735 322 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 B2MP61769 119 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 ZNF792Q3KQV3 632 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 CDONQ4KMG0 1287 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 FAM180BQ6P0A1 224 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 DRICH1Q6PGQ1 229 aaPredicted RBP11.14□□□□□ -0.63
SND1-201ENST00000354725 C4orf50Q6ZRC1 276 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 MON1BQ7L1V2 547 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 GPR142Q7Z601 462 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 C4orf19Q8IY42 314 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 BCL7CQ8WUZ0 217 aaPredicted RBP11.14□□□□□ -0.63
SND1-201ENST00000354725 PEX13Q92968 403 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 PRICKLE1Q96MT3 831 aaPredicted RBP11.14□□□□□ -0.63
SND1-201ENST00000354725 TTPALQ9BTX7 342 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 PDLIM7Q9NR12 457 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 GIN1Q9NXP7 522 aa11.14□□□□□ -0.63
SND1-201ENST00000354725 MYH9P35579 1960 aaKnown RBP11.13□□□□□ -0.63
SND1-201ENST00000354725 ARHGEF35A5YM69 484 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 CHMP2AO43633 222 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 ZNF862O60290 1169 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 FKTNO75072 461 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 GUCY1B2O75343 617 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 CRYZL1O95825 349 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 GH1P01241 217 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 TAC1P20366 129 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 TKFCQ3LXA3 575 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 KRT39Q6A163 491 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 ANKS1BQ7Z6G8 1248 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 ITIH5Q86UX2 942 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 CCDC105Q8IYK2 499 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 EME1Q96AY2 570 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 GPATCH1Q9BRR8 931 aaKnown RBP11.13□□□□□ -0.63
SND1-201ENST00000354725 RAVER2Q9HCJ3 691 aaKnown RBP11.13□□□□□ -0.63
SND1-201ENST00000354725 KCNH7Q9NS40 1196 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 STX18Q9P2W9 335 aaKnown RBP11.13□□□□□ -0.63
SND1-201ENST00000354725 CHORDC1Q9UHD1 332 aaPredicted RBP11.13□□□□□ -0.63
SND1-201ENST00000354725 MRPL11Q9Y3B7 192 aaKnown RBP11.13□□□□□ -0.63
SND1-201ENST00000354725 TCP11X1B4DZS4 312 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 M0QX08 132 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 SLC25A27O95847 323 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 FUCA1P04066 466 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 FYNP06241 537 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 OCM2P0CE71 109 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 OCMP0CE72 109 aaPredicted RBP11.13□□□□□ -0.63
SND1-201ENST00000354725 DLATP10515 647 aaKnown RBP11.13□□□□□ -0.63
SND1-201ENST00000354725 CDH3P22223 829 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 PTGS2P35354 604 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 ATP5OP48047 213 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 GRM2Q14416 872 aa11.13□□□□□ -0.63
SND1-201ENST00000354725 SF3B4Q15427 424 aaKnown RBP eCLIP11.13□□□□□ -0.635e-7■■■■□ 23
SND1-201ENST00000354725 KCNJ8Q15842 424 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms