RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 TMEM51Q9NW97 253 aa21.22■□□□□ 0.99
TRIM4-202ENST00000354241 DTLQ9NZJ0 730 aa21.22■□□□□ 0.99
TRIM4-202ENST00000354241 MTRF1LQ9UGC7 380 aaKnown RBP21.22■□□□□ 0.99
TRIM4-202ENST00000354241 DCLK1O15075 740 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 LRIG2O94898 1065 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 EPHB3P54753 998 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 ERVFC1P60507 584 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 CDKL3Q8IVW4 592 aaPredicted RBP21.21■□□□□ 0.99
TRIM4-202ENST00000354241 TSEN2Q8NCE0 465 aaKnown RBP21.21■□□□□ 0.99
TRIM4-202ENST00000354241 SLC39A13Q96H72 371 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 C17orf80Q9BSJ5 609 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 ANAPC5Q9UJX4 755 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 MAFFQ9ULX9 164 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 RWDD3Q9Y3V2 267 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 SLC12A8A0AV02 714 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 KCNU1A8MYU2 1149 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 KCNN4O15554 427 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 TGM5O43548 720 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 APOEP02649 317 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 HMBSP08397 361 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 SRGAP2BP0DMP2 458 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 SLC2A3P11169 496 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 MYOGP15173 224 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 EPHB2P29323 1055 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 TRIP4Q15650 581 aaPredicted RBP21.21■□□□□ 0.99
TRIM4-202ENST00000354241 C9orf50Q5SZB4 431 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 PLPP4Q5VZY2 271 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 BBOF1Q8ND07 529 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 KLHL5Q96PQ7 755 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 FAM129AQ9BZQ8 928 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 XPO7Q9UIA9 1087 aaKnown RBP21.21■□□□□ 0.99
TRIM4-202ENST00000354241 LZTS1Q9Y250 596 aa21.21■□□□□ 0.99
TRIM4-202ENST00000354241 GBF1Q92538 1859 aa21.2■□□□□ 0.99
TRIM4-202ENST00000354241 RBL1P28749 1068 aa21.2■□□□□ 0.98
TRIM4-202ENST00000354241 STIP1P31948 543 aaKnown RBP21.2■□□□□ 0.98
TRIM4-202ENST00000354241 XRCC4Q13426 336 aa21.2■□□□□ 0.98
TRIM4-202ENST00000354241 PAFAH1B3Q15102 231 aaKnown RBP21.2■□□□□ 0.98
TRIM4-202ENST00000354241 RWDD4Q6NW29 188 aaKnown RBP21.2■□□□□ 0.98
TRIM4-202ENST00000354241 BZW1Q7L1Q6 419 aaKnown RBP21.2■□□□□ 0.98
TRIM4-202ENST00000354241 NETO2Q8NC67 525 aa21.2■□□□□ 0.98
TRIM4-202ENST00000354241 POF1BQ8WVV4 589 aa21.2■□□□□ 0.98
TRIM4-202ENST00000354241 ZBTB9Q96C00 473 aa21.2■□□□□ 0.98
TRIM4-202ENST00000354241 LRRC45Q96CN5 670 aa21.2■□□□□ 0.98
TRIM4-202ENST00000354241 MYRFLQ96LU7 910 aa21.2■□□□□ 0.98
TRIM4-202ENST00000354241 CDK5RAP1Q96SZ6 601 aaKnown RBP21.2■□□□□ 0.98
TRIM4-202ENST00000354241 NACA2Q9H009 215 aa21.2■□□□□ 0.98
TRIM4-202ENST00000354241 TRPM5Q9NZQ8 1165 aa21.2■□□□□ 0.98
TRIM4-202ENST00000354241 HPCAL4Q9UM19 191 aa21.2■□□□□ 0.98
TRIM4-202ENST00000354241 BCLAF3A2AJT9 711 aaKnown RBP21.19■□□□□ 0.98
TRIM4-202ENST00000354241 CFAP69A5D8W1 941 aa21.19■□□□□ 0.98
TRIM4-202ENST00000354241 ZNF840PA6NDX5 716 aa21.19■□□□□ 0.98
TRIM4-202ENST00000354241 GRXCR1A8MXD5 290 aa21.19■□□□□ 0.98
TRIM4-202ENST00000354241 ADH1AP07327 375 aa21.19■□□□□ 0.98
TRIM4-202ENST00000354241 NRLP54845 237 aa21.19■□□□□ 0.98
TRIM4-202ENST00000354241 SLC45A4Q5BKX6 768 aa21.19■□□□□ 0.98
TRIM4-202ENST00000354241 SPRED2Q7Z698 418 aa21.19■□□□□ 0.98
TRIM4-202ENST00000354241 TRMT2BQ96GJ1 504 aaKnown RBP21.19■□□□□ 0.98
TRIM4-202ENST00000354241 EMILIN2Q9BXX0 1053 aa21.19■□□□□ 0.98
TRIM4-202ENST00000354241 HS3ST4Q9Y661 456 aa21.19■□□□□ 0.98
TRIM4-202ENST00000354241 DNALI1O14645 258 aaPredicted RBP21.19■□□□□ 0.98
TRIM4-202ENST00000354241 RPL22P35268 128 aaKnown RBP21.19■□□□□ 0.98
TRIM4-202ENST00000354241 HSPA9P38646 679 aaKnown RBP21.19■□□□□ 0.98
TRIM4-202ENST00000354241 CAV1Q03135 178 aa21.19■□□□□ 0.98
TRIM4-202ENST00000354241 DHX9Q08211 1270 aaKnown RBP21.19■□□□□ 0.98
TRIM4-202ENST00000354241 DNAJB7Q7Z6W7 309 aaPredicted RBP21.19■□□□□ 0.98
TRIM4-202ENST00000354241 TADA2BQ86TJ2 420 aa21.19■□□□□ 0.98
TRIM4-202ENST00000354241 MREGQ8N565 214 aa21.19■□□□□ 0.98
TRIM4-202ENST00000354241 ATP6V0D2Q8N8Y2 350 aa21.19■□□□□ 0.98
TRIM4-202ENST00000354241 OLFM3Q96PB7 478 aa21.19■□□□□ 0.98
TRIM4-202ENST00000354241 QKIQ96PU8 341 aaKnown RBP eCLIP21.19■□□□□ 0.98
TRIM4-202ENST00000354241 VIPAS39Q9H9C1 493 aa21.19■□□□□ 0.98
TRIM4-202ENST00000354241 USP29Q9HBJ7 922 aa21.19■□□□□ 0.98
TRIM4-202ENST00000354241 SLC12A6Q9UHW9 1150 aa21.19■□□□□ 0.98
TRIM4-202ENST00000354241 TP73O15350 636 aa21.18■□□□□ 0.98
TRIM4-202ENST00000354241 ARHGEF15O94989 841 aa21.18■□□□□ 0.98
TRIM4-202ENST00000354241 DNAJB1P25685 340 aa21.18■□□□□ 0.98
TRIM4-202ENST00000354241 ATP5C1P36542 298 aaKnown RBP21.18■□□□□ 0.98
TRIM4-202ENST00000354241 HECTD3Q5T447 861 aa21.18■□□□□ 0.98
TRIM4-202ENST00000354241 SNX30Q5VWJ9 437 aa21.18■□□□□ 0.98
TRIM4-202ENST00000354241 PDZD4Q76G19 769 aaPredicted RBP21.18■□□□□ 0.98
TRIM4-202ENST00000354241 TMC3Q7Z5M5 1100 aa21.18■□□□□ 0.98
TRIM4-202ENST00000354241 TAB3Q8N5C8 712 aaPredicted RBP21.18■□□□□ 0.98
TRIM4-202ENST00000354241 SPPL3Q8TCT6 385 aa21.18■□□□□ 0.98
TRIM4-202ENST00000354241 PSMG2Q969U7 264 aa21.18■□□□□ 0.98
TRIM4-202ENST00000354241 TLR9Q9NR96 1032 aa21.18■□□□□ 0.98
TRIM4-202ENST00000354241 DNMT3LQ9UJW3 386 aa21.18■□□□□ 0.98
TRIM4-202ENST00000354241 TPX2Q9ULW0 747 aaKnown RBP21.18■□□□□ 0.98
TRIM4-202ENST00000354241 ANAPC1Q9H1A4 1944 aa21.18■□□□□ 0.98
TRIM4-202ENST00000354241 HIDE1A8MVS5 230 aa21.17■□□□□ 0.98
TRIM4-202ENST00000354241 PIK3R6Q5UE93 754 aa21.17■□□□□ 0.98
TRIM4-202ENST00000354241 FAM109BQ6ICB4 259 aaPredicted RBP21.17■□□□□ 0.98
TRIM4-202ENST00000354241 RHBDF2Q6PJF5 856 aa21.17■□□□□ 0.98
TRIM4-202ENST00000354241 ITIH5Q86UX2 942 aa21.17■□□□□ 0.98
TRIM4-202ENST00000354241 TFB1MQ8WVM0 346 aaKnown RBP21.17■□□□□ 0.98
TRIM4-202ENST00000354241 TBC1D31Q96DN5 1066 aa21.17■□□□□ 0.98
TRIM4-202ENST00000354241 ACBD3Q9H3P7 528 aa21.17■□□□□ 0.98
TRIM4-202ENST00000354241 UXTQ9UBK9 157 aaPredicted RBP21.17■□□□□ 0.98
TRIM4-202ENST00000354241 ATP8A1Q9Y2Q0 1164 aa21.17■□□□□ 0.98
TRIM4-202ENST00000354241 C2orf71A6NGG8 1288 aa21.17■□□□□ 0.98
TRIM4-202ENST00000354241 HACD1B0YJ81 288 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms