RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 MYL2P10916 166 aa22.45■■□□□ 1.18
SHMT1-202ENST00000352886 TMPRSS15P98073 1019 aa22.45■■□□□ 1.18
SHMT1-202ENST00000352886 CCNYQ8ND76 341 aa22.45■■□□□ 1.18
SHMT1-202ENST00000352886 E2F7Q96AV8 911 aa22.45■■□□□ 1.18
SHMT1-202ENST00000352886 PRR11Q96HE9 360 aaPredicted RBP22.45■■□□□ 1.18
SHMT1-202ENST00000352886 MED10Q9BTT4 135 aa22.45■■□□□ 1.18
SHMT1-202ENST00000352886 CACNG4Q9UBN1 327 aa22.45■■□□□ 1.18
SHMT1-202ENST00000352886 CCDC195A0A1B0GUA6 201 aa22.44■■□□□ 1.18
SHMT1-202ENST00000352886 FAM237BA0A1B0GVD1 139 aa22.44■■□□□ 1.18
SHMT1-202ENST00000352886 MLNP12872 115 aa22.44■■□□□ 1.18
SHMT1-202ENST00000352886 SESN2P58004 480 aaPredicted RBP22.44■■□□□ 1.18
SHMT1-202ENST00000352886 BST1Q10588 318 aa22.44■■□□□ 1.18
SHMT1-202ENST00000352886 MAP2K5Q13163 448 aa22.44■■□□□ 1.18
SHMT1-202ENST00000352886 MDH1BQ5I0G3 518 aa22.44■■□□□ 1.18
SHMT1-202ENST00000352886 HFE2Q6ZVN8 426 aa22.44■■□□□ 1.18
SHMT1-202ENST00000352886 BNIPLQ7Z465 357 aa22.44■■□□□ 1.18
SHMT1-202ENST00000352886 TRIM42Q8IWZ5 723 aa22.44■■□□□ 1.18
SHMT1-202ENST00000352886 NME8Q8N427 588 aa22.44■■□□□ 1.18
SHMT1-202ENST00000352886 SDR42E2A6NKP2 422 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 HNRNPCL1O60812 293 aaKnown RBP22.43■■□□□ 1.18
SHMT1-202ENST00000352886 OPHN1O60890 802 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 DNAJC6O75061 913 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 LRPAP1P30533 357 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 CPT1AP50416 773 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 MAP3K7CLP57077 242 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 DEUP1Q05D60 604 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 CHI3L2Q15782 390 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 MORN1Q5T089 497 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 KIAA0319Q5VV43 1072 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 BSPRYQ5W0U4 402 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 STEAP4Q687X5 459 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 LRRC8BQ6P9F7 803 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 KCTD13Q8WZ19 329 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 PIGVQ9NUD9 493 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 ARL8BQ9NVJ2 186 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 SLC17A6Q9P2U8 582 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 C17orf102A2RUQ5 167 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 CRHR1P34998 444 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 GLUD2P49448 558 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 TKTL1P51854 596 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 RABGGTBP53611 331 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 CES4AQ5XG92 561 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 CYS1Q717R9 158 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 NUDCD3Q8IVD9 361 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 UPF1Q92900 1129 aaKnown RBP eCLIP22.43■■□□□ 1.182e-6■■■■□ 24.1
SHMT1-202ENST00000352886 WNT8BQ93098 351 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 TACO1Q9BSH4 297 aaKnown RBP22.43■■□□□ 1.18
SHMT1-202ENST00000352886 PRDM12Q9H4Q4 367 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 PRDM16Q9HAZ2 1276 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 KRT82Q9NSB4 513 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 SIRPGQ9P1W8 387 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 C15orf41Q9Y2V0 281 aa22.43■■□□□ 1.18
SHMT1-202ENST00000352886 ALDH1A2O94788 518 aa22.42■■□□□ 1.18
SHMT1-202ENST00000352886 TOP3BO95985 862 aaKnown RBP22.42■■□□□ 1.18
SHMT1-202ENST00000352886 MGAT1P26572 445 aa22.42■■□□□ 1.18
SHMT1-202ENST00000352886 PSMB4P28070 264 aa22.42■■□□□ 1.18
SHMT1-202ENST00000352886 PDK1Q15118 436 aa22.42■■□□□ 1.18
SHMT1-202ENST00000352886 CCL14Q16627 93 aa22.42■■□□□ 1.18
SHMT1-202ENST00000352886 ATG16L1Q676U5 607 aa22.42■■□□□ 1.18
SHMT1-202ENST00000352886 GIMAP7Q8NHV1 300 aa22.42■■□□□ 1.18
SHMT1-202ENST00000352886 C7orf26Q96N11 449 aa22.42■■□□□ 1.18
SHMT1-202ENST00000352886 PPP1R10Q96QC0 940 aaKnown RBP22.42■■□□□ 1.18
SHMT1-202ENST00000352886 SLC2A13Q96QE2 648 aa22.42■■□□□ 1.18
SHMT1-202ENST00000352886 FERMT1Q9BQL6 677 aa22.42■■□□□ 1.18
SHMT1-202ENST00000352886 EIF2B3Q9NR50 452 aaKnown RBP22.42■■□□□ 1.18
SHMT1-202ENST00000352886 EEF2KO00418 725 aaKnown RBP22.42■■□□□ 1.18
SHMT1-202ENST00000352886 GABRDO14764 452 aa22.42■■□□□ 1.18
SHMT1-202ENST00000352886 CAPN15O75808 1086 aa22.42■■□□□ 1.18
SHMT1-202ENST00000352886 RPSAP08865 295 aaKnown RBP22.42■■□□□ 1.18
SHMT1-202ENST00000352886 TP53INP2Q8IXH6 220 aa22.42■■□□□ 1.18
SHMT1-202ENST00000352886 RNF169Q8NCN4 708 aa22.42■■□□□ 1.18
SHMT1-202ENST00000352886 NSMCE1Q8WV22 266 aa22.42■■□□□ 1.18
SHMT1-202ENST00000352886 MIPEPQ99797 713 aa22.42■■□□□ 1.18
SHMT1-202ENST00000352886 DDX43Q9NXZ2 648 aaKnown RBP22.42■■□□□ 1.18
SHMT1-202ENST00000352886 MEIS3P2A8K0S8 358 aa22.41■■□□□ 1.18
SHMT1-202ENST00000352886 FAM200BP0CF97 657 aa22.41■■□□□ 1.18
SHMT1-202ENST00000352886 CNTFP26441 200 aa22.41■■□□□ 1.18
SHMT1-202ENST00000352886 WASHC5Q12768 1159 aa22.41■■□□□ 1.18
SHMT1-202ENST00000352886 DPYSQ14117 519 aa22.41■■□□□ 1.18
SHMT1-202ENST00000352886 RFX8Q6ZV50 586 aa22.41■■□□□ 1.18
SHMT1-202ENST00000352886 MARK2Q7KZI7 788 aaKnown RBP22.41■■□□□ 1.18
SHMT1-202ENST00000352886 ZNF567Q8N184 647 aa22.41■■□□□ 1.18
SHMT1-202ENST00000352886 STKLD1Q8NE28 680 aa22.41■■□□□ 1.18
SHMT1-202ENST00000352886 SLC7A14Q8TBB6 771 aa22.41■■□□□ 1.18
SHMT1-202ENST00000352886 ADAM32Q8TC27 787 aa22.41■■□□□ 1.18
SHMT1-202ENST00000352886 ARNTL2Q8WYA1 636 aa22.41■■□□□ 1.18
SHMT1-202ENST00000352886 PTCD3Q96EY7 689 aaKnown RBP22.41■■□□□ 1.18
SHMT1-202ENST00000352886 TLE6Q9H808 572 aa22.41■■□□□ 1.18
SHMT1-202ENST00000352886 SF3B1O75533 1304 aaKnown RBP eCLIP22.41■■□□□ 1.188e-11■■■■■ 206.8
SHMT1-202ENST00000352886 NRP1O14786 923 aa22.41■■□□□ 1.18
SHMT1-202ENST00000352886 PPP1R12AO14974 1030 aaPredicted RBP22.41■■□□□ 1.18
SHMT1-202ENST00000352886 CCDC22O60826 627 aa22.41■■□□□ 1.18
SHMT1-202ENST00000352886 RARBP10826 455 aa22.41■■□□□ 1.18
SHMT1-202ENST00000352886 NIPAL4Q0D2K0 466 aa22.41■■□□□ 1.18
SHMT1-202ENST00000352886 TIFABQ6ZNK6 161 aa22.41■■□□□ 1.18
SHMT1-202ENST00000352886 TTC7BQ86TV6 843 aa22.41■■□□□ 1.18
SHMT1-202ENST00000352886 PGBD4Q96DM1 585 aa22.41■■□□□ 1.18
SHMT1-202ENST00000352886 AP5M1Q9H0R1 490 aa22.41■■□□□ 1.18
SHMT1-202ENST00000352886 ZNF395Q9H8N7 513 aaPredicted RBP22.41■■□□□ 1.18
SHMT1-202ENST00000352886 CAPN9O14815 690 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms