RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 REM2Q8IYK8 340 aaPredicted RBP13.61□□□□□ -0.23
IFT88-202ENST00000351808 SLFN12Q8IYM2 578 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 RCOR2Q8IZ40 523 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 ZNF341Q9BYN7 854 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 ANKMY1Q9P2S6 941 aa13.61□□□□□ -0.23
IFT88-202ENST00000351808 LOC105371267A0A1B0GV96 52 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 CLOCKO15516 846 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 SLC26A4O43511 780 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 JRKO75564 520 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 BCL10O95999 233 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 ENO3P13929 434 aaPredicted RBP13.6□□□□□ -0.23
IFT88-202ENST00000351808 SSTR3P32745 418 aaPredicted RBP13.6□□□□□ -0.23
IFT88-202ENST00000351808 HPCAL1P37235 193 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 TMEM132AQ24JP5 1023 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 ZNF394Q53GI3 561 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 FAM47CQ5HY64 1035 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 ODR4Q5SWX8 454 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 MROH9Q5TGP6 573 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 SLC30A10Q6XR72 485 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 KRT28Q7Z3Y7 464 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 SNX32Q86XE0 403 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 KYQ8NBH2 561 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 ADAMTS16Q8TE57 1224 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 NKD2Q969F2 451 aaPredicted RBP13.6□□□□□ -0.23
IFT88-202ENST00000351808 C11orf70Q9BRQ4 267 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 C1orf50Q9BV19 199 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 ANKRD60Q9BZ19 345 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 MARCH7Q9H992 704 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 KLQ9UEF7 1012 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 MOSPD1Q9UJG1 213 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 UNCXA6NJT0 531 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 P4HBP07237 508 aaKnown RBP13.6□□□□□ -0.23
IFT88-202ENST00000351808 CKMT2P17540 419 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 ADSLP30566 484 aaPredicted RBP13.6□□□□□ -0.23
IFT88-202ENST00000351808 RFC1P35251 1148 aaPredicted RBP13.6□□□□□ -0.23
IFT88-202ENST00000351808 SLC10A2Q12908 348 aaPredicted RBP13.6□□□□□ -0.23
IFT88-202ENST00000351808 DPYSQ14117 519 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 INAVAQ3KP66 663 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 MTX3Q5HYI7 312 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 MBLAC2Q68D91 279 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 SIGIRRQ6IA17 410 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 TTBK2Q6IQ55 1244 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 SPOCD1Q6ZMY3 1216 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 MAPKAPK5Q8IW41 473 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 ADGRF2Q8IZF7 708 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 LRRC47Q8N1G4 583 aaKnown RBP13.6□□□□□ -0.23
IFT88-202ENST00000351808 SLC43A3Q8NBI5 491 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 DLG3Q92796 817 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 JMJD4Q9H9V9 463 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 ZNRF3Q9ULT6 936 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 GPSM3Q9Y4H4 160 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 SNX13Q9Y5W8 968 aa13.6□□□□□ -0.23
IFT88-202ENST00000351808 ZNF142P52746 1687 aaPredicted RBP13.59□□□□□ -0.23
IFT88-202ENST00000351808 H0YJX3 145 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 ZNF195O14628 629 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 BCAS2O75934 225 aaPredicted RBP13.59□□□□□ -0.23
IFT88-202ENST00000351808 GSRP00390 522 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 FGF3P11487 239 aaPredicted RBP13.59□□□□□ -0.23
IFT88-202ENST00000351808 MYL4P12829 197 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 CCNA2P20248 432 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 ME2P23368 584 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 POLR2BP30876 1174 aaKnown RBP13.59□□□□□ -0.23
IFT88-202ENST00000351808 ARRB2P32121 409 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 OPRL1P41146 370 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 CDK8P49336 464 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 EIF6P56537 245 aaKnown RBP13.59□□□□□ -0.23
IFT88-202ENST00000351808 PSMC5P62195 406 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 NEDD8Q15843 81 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 SHROOM1Q2M3G4 852 aaPredicted RBP13.59□□□□□ -0.23
IFT88-202ENST00000351808 FSCBQ5H9T9 825 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 SLC27A3Q5K4L6 730 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 TXNRD3NBQ6F5E7 133 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 ZNF280DQ6N043 979 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 KCNT2Q6UVM3 1135 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 C16orf89Q6UX73 402 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 KIAA2013Q8IYS2 634 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 TTC39CQ8N584 583 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 NANOGQ9H9S0 305 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 CNGB3Q9NQW8 809 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 DNAJC28Q9NX36 388 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 DUS2Q9NX74 493 aaKnown RBP13.59□□□□□ -0.23
IFT88-202ENST00000351808 TBC1D14Q9P2M4 693 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 DNMT3BQ9UBC3 853 aaKnown RBP13.59□□□□□ -0.23
IFT88-202ENST00000351808 SEPT3Q9UH03 358 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 ARFGEF1Q9Y6D6 1849 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 MYH9P35579 1960 aaKnown RBP13.59□□□□□ -0.23
IFT88-202ENST00000351808 PNMA6FA0A0J9YX94 578 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 KMOO15229 486 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 TLR3O15455 904 aaKnown RBP13.59□□□□□ -0.23
IFT88-202ENST00000351808 CLPXO76031 633 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 DPP6P42658 865 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 NSFP46459 744 aaKnown RBP13.59□□□□□ -0.23
IFT88-202ENST00000351808 GPC3P51654 580 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 PLA2G4FQ68DD2 849 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 C1orf186Q6ZWK4 172 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 UTS2BQ765I0 119 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 ADGRF4Q8IZF3 695 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 NEDD1Q8NHV4 660 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 CBWD1Q9BRT8 395 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 ATF5Q9Y2D1 282 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms