RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 TNFRSF8P28908 595 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 CHRNB3Q05901 458 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 FKBP1CQ5VVH2 108 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 PRELID2Q8N945 189 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 FAM84AQ96KN4 292 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 PWWP2AQ96N64 755 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 ADGRE3Q9BY15 652 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 ETNK2Q9NVF9 386 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 SIGLEC16A6NMB1 481 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 TSPAN3O60637 253 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 WDR47O94967 919 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 OR1E1P30953 314 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 ATN1P54259 1190 aaPredicted RBP16.39■□□□□ 0.21
PTPN11-201ENST00000351677 CRADDP78560 199 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 ARSHQ5FYA8 562 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 IRF2BP2Q7Z5L9 587 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 ZNF410Q86VK4 478 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 TMPRSS6Q8IU80 811 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 KYQ8NBH2 561 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 TNFRSF25Q93038 417 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 TKTL2Q9H0I9 626 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 TRIM13O60858 407 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 RAMP2O60895 175 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 ERVK-10P10266 1014 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 BDNFP23560 247 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 ITGB3BPQ13352 177 aaPredicted RBP16.39■□□□□ 0.21
PTPN11-201ENST00000351677 UGCGQ16739 394 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 SLC44A2Q8IWA5 706 aaPredicted RBP16.39■□□□□ 0.21
PTPN11-201ENST00000351677 MICU2Q8IYU8 434 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 PCSK9Q8NBP7 692 aaKnown RBP16.39■□□□□ 0.21
PTPN11-201ENST00000351677 ABHD16BQ9H3Z7 469 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 SELENONQ9NZV5 590 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 SYNPO2Q9UMS6 1093 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 TTLL13PA6NNM8 815 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 LIASO43766 372 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 GUCA1CO95843 209 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 ALDH2P05091 517 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 EPB42P16452 691 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 ITGB5P18084 799 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 IRX1P78414 480 aaPredicted RBP16.39■□□□□ 0.21
PTPN11-201ENST00000351677 ACVR2BQ13705 512 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 ACAP1Q15027 740 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 TRMT5Q32P41 509 aaKnown RBP16.39■□□□□ 0.21
PTPN11-201ENST00000351677 RNF148Q8N7C7 305 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 ACOX2Q99424 681 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 FGFBP2Q9BYJ0 223 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 ULBP1Q9BZM6 244 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 PCYOX1Q9UHG3 505 aa16.39■□□□□ 0.21
PTPN11-201ENST00000351677 CHKAP35790 457 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 DEPDC1Q5TB30 811 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 CATSPERGQ6ZRH7 1159 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 SLC22A9Q8IVM8 553 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 ABHD8Q96I13 439 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.38■□□□□ 0.21
PTPN11-201ENST00000351677 MMRN1Q13201 1228 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 FAM183BPQ6ZVS7 135 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 HSD17B14Q9BPX1 270 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 MTG1Q9BT17 334 aaPredicted RBP16.38■□□□□ 0.21
PTPN11-201ENST00000351677 HES2Q9Y543 173 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 PIAS1O75925 651 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 OCM2P0CE71 109 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 OCMP0CE72 109 aaPredicted RBP16.38■□□□□ 0.21
PTPN11-201ENST00000351677 RAP1GDS1P52306 607 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 PRKAA1Q13131 559 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 SPDYCQ5MJ68 293 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 CELF3Q5SZQ8 465 aaKnown RBP16.38■□□□□ 0.21
PTPN11-201ENST00000351677 LRRN4Q8WUT4 740 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 TBL1YQ9BQ87 522 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 MTIF3Q9H2K0 278 aaKnown RBP16.38■□□□□ 0.21
PTPN11-201ENST00000351677 DMAP1Q9NPF5 467 aaPredicted RBP16.38■□□□□ 0.21
PTPN11-201ENST00000351677 SLC25A13Q9UJS0 675 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 PCDHB5Q9Y5E4 795 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 TGFB1I1O43294 461 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 STRNO43815 780 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 FKBP6O75344 327 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 DDHD2O94830 711 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 ATP6V1B2P21281 511 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 NPY2RP49146 381 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 BEX3Q00994 111 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 AUHQ13825 339 aaKnown RBP16.38■□□□□ 0.21
PTPN11-201ENST00000351677 KIAA0319LQ8IZA0 1049 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 OR5B17Q8NGF7 314 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 STARD7Q9NQZ5 370 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 KATNA1O75449 491 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 PDE5AO76074 875 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 CPSF4O95639 269 aaKnown RBP16.38■□□□□ 0.21
PTPN11-201ENST00000351677 SERPINF2P08697 491 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 PSEN2P49810 448 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 PLK1P53350 603 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 PWP1Q13610 501 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 CNGA2Q16280 664 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 DEFB128Q7Z7B8 93 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 SPATA20Q8TB22 786 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 POPDC2Q9HBU9 364 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 RGS18Q9NS28 235 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 TRHDEQ9UKU6 1024 aa16.38■□□□□ 0.21
PTPN11-201ENST00000351677 BTNL10A8MVZ5 291 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 F8W810 466 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 WEE1P30291 646 aa16.37■□□□□ 0.21
PTPN11-201ENST00000351677 NR6A1Q15406 480 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms