RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 Q6ZNX1 250 aa19.19■□□□□ 0.66
SCARF1-202ENST00000348987 TRIM56Q9BRZ2 755 aaKnown RBP19.19■□□□□ 0.66
SCARF1-202ENST00000348987 R3HDMLQ9H3Y0 253 aa19.19■□□□□ 0.66
SCARF1-202ENST00000348987 TBCCD1Q9NVR7 557 aa19.19■□□□□ 0.66
SCARF1-202ENST00000348987 GGA3Q9NZ52 723 aa19.19■□□□□ 0.66
SCARF1-202ENST00000348987 PARP14Q460N5 1801 aa19.19■□□□□ 0.66
SCARF1-202ENST00000348987 HMX2A2RU54 273 aa19.19■□□□□ 0.66
SCARF1-202ENST00000348987 DCXO43602 365 aa19.19■□□□□ 0.66
SCARF1-202ENST00000348987 CSH1P0DML2 217 aa19.19■□□□□ 0.66
SCARF1-202ENST00000348987 CSH2P0DML3 217 aa19.19■□□□□ 0.66
SCARF1-202ENST00000348987 THRAP10827 490 aa19.19■□□□□ 0.66
SCARF1-202ENST00000348987 IL1R2P27930 398 aa19.19■□□□□ 0.66
SCARF1-202ENST00000348987 USP41Q3LFD5 358 aa19.19■□□□□ 0.66
SCARF1-202ENST00000348987 BBS12Q6ZW61 710 aa19.19■□□□□ 0.66
SCARF1-202ENST00000348987 EEPD1Q7L9B9 569 aa19.19■□□□□ 0.66
SCARF1-202ENST00000348987 ARCQ7LC44 396 aa19.19■□□□□ 0.66
SCARF1-202ENST00000348987 PATL1Q86TB9 770 aaKnown RBP19.19■□□□□ 0.66
SCARF1-202ENST00000348987 NLGN2Q8NFZ4 835 aa19.19■□□□□ 0.66
SCARF1-202ENST00000348987 ZC3H7BQ9UGR2 993 aaKnown RBP19.19■□□□□ 0.66
SCARF1-202ENST00000348987 ZNF180Q9UJW8 692 aa19.19■□□□□ 0.66
SCARF1-202ENST00000348987 CENPFP49454 3210 aa19.19■□□□□ 0.66
SCARF1-202ENST00000348987 ATG7O95352 703 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 PDGFRBP09619 1106 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 CRHR1P34998 444 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 ENTPD1P49961 510 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 PIGHQ14442 188 aaPredicted RBP19.18■□□□□ 0.66
SCARF1-202ENST00000348987 POTEHQ6S545 545 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 KCNK16Q96T55 309 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 PLAC1Q9HBJ0 212 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 PNPLA8Q9NP80 782 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 RRN3Q9NYV6 651 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 SH3PXD2BA1X283 911 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 LDHAP00338 332 aaKnown RBP19.18■□□□□ 0.66
SCARF1-202ENST00000348987 GSRP00390 522 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 CD1EP15812 388 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 PORP16435 677 aaPredicted RBP19.18■□□□□ 0.66
SCARF1-202ENST00000348987 MLH1P40692 756 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 OSTNP61366 133 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 NAA20P61599 178 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 ORC1Q13415 861 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 C16orf72Q14CZ0 275 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 MBLAC2Q68D91 279 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 KIAA0319LQ8IZA0 1049 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 LILRA2Q8N149 483 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 ARFGAP1Q8N6T3 406 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 FAF2Q96CS3 445 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 SLX1AQ9BQ83 275 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 IMPG2Q9BZV3 1241 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 ARHGAP26Q9UNA1 814 aa19.18■□□□□ 0.66
SCARF1-202ENST00000348987 KRT38O76015 456 aa19.17■□□□□ 0.66
SCARF1-202ENST00000348987 UBA1P22314 1058 aaKnown RBP19.17■□□□□ 0.66
SCARF1-202ENST00000348987 RFC1P35251 1148 aaPredicted RBP19.17■□□□□ 0.66
SCARF1-202ENST00000348987 CCR3P51677 355 aa19.17■□□□□ 0.66
SCARF1-202ENST00000348987 YWHAZP63104 245 aaKnown RBP19.17■□□□□ 0.66
SCARF1-202ENST00000348987 ADGRE1Q14246 886 aa19.17■□□□□ 0.66
SCARF1-202ENST00000348987 KCNJ11Q14654 390 aa19.17■□□□□ 0.66
SCARF1-202ENST00000348987 STXBP2Q15833 593 aa19.17■□□□□ 0.66
SCARF1-202ENST00000348987 CATSPERGQ6ZRH7 1159 aa19.17■□□□□ 0.66
SCARF1-202ENST00000348987 RFX6Q8HWS3 928 aa19.17■□□□□ 0.66
SCARF1-202ENST00000348987 TRIML2Q8N7C3 387 aa19.17■□□□□ 0.66
SCARF1-202ENST00000348987 COX4I1P13073 169 aa19.17■□□□□ 0.66
SCARF1-202ENST00000348987 KDELR1P24390 212 aa19.17■□□□□ 0.66
SCARF1-202ENST00000348987 ATXN3P54252 364 aaPredicted RBP19.17■□□□□ 0.66
SCARF1-202ENST00000348987 OAZ1P54368 228 aa19.17■□□□□ 0.66
SCARF1-202ENST00000348987 TRIM50Q86XT4 487 aa19.17■□□□□ 0.66
SCARF1-202ENST00000348987 SPATA18Q8TC71 538 aa19.17■□□□□ 0.66
SCARF1-202ENST00000348987 ZNF512Q96ME7 567 aaPredicted RBP19.17■□□□□ 0.66
SCARF1-202ENST00000348987 OXCT2Q9BYC2 517 aaPredicted RBP19.17■□□□□ 0.66
SCARF1-202ENST00000348987 MKS1Q9NXB0 559 aa19.17■□□□□ 0.66
SCARF1-202ENST00000348987 CYTH4Q9UIA0 394 aa19.17■□□□□ 0.66
SCARF1-202ENST00000348987 RIMS3Q9UJD0 308 aa19.17■□□□□ 0.66
SCARF1-202ENST00000348987 TRIM43BA6NCK2 446 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 MSCO60682 206 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 GJB1P08034 283 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 TFPTP0C1Z6 253 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 FGF3P11487 239 aaPredicted RBP19.16■□□□□ 0.66
SCARF1-202ENST00000348987 TFAMQ00059 246 aaKnown RBP19.16■□□□□ 0.66
SCARF1-202ENST00000348987 BTG3Q14201 252 aaPredicted RBP19.16■□□□□ 0.66
SCARF1-202ENST00000348987 NPNTQ6UXI9 565 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 PACS1Q6VY07 963 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 LPCAT2Q7L5N7 544 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 TICAM1Q8IUC6 712 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 BRSK2Q8IWQ3 736 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 LRRC71Q8N4P6 559 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 JOSD2Q8TAC2 188 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 GRIN3AQ8TCU5 1115 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 GIPC3Q8TF64 312 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 CCT7Q99832 543 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 MAN1C1Q9NR34 630 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 AFG3L2Q9Y4W6 797 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 XPO1O14980 1071 aaKnown RBP19.16■□□□□ 0.66
SCARF1-202ENST00000348987 MCF2LO15068 1137 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 NELFEP18615 380 aaKnown RBP19.16■□□□□ 0.66
SCARF1-202ENST00000348987 RAP1GAPP47736 663 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 TARBP2Q15633 366 aaKnown RBP19.16■□□□□ 0.66
SCARF1-202ENST00000348987 ANKDD1AQ495B1 522 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 FAXCQ5TGI0 409 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 TRMT10BQ6PF06 316 aaKnown RBP19.16■□□□□ 0.66
SCARF1-202ENST00000348987 CROCCP3Q8IVE0 287 aa19.16■□□□□ 0.66
SCARF1-202ENST00000348987 EMC1Q8N766 993 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms