RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 PIGKQ92643 395 aa13.82□□□□□ -0.2
CLCC1-202ENST00000348264 TMA16Q96EY4 203 aaKnown RBP13.82□□□□□ -0.2
CLCC1-202ENST00000348264 MYEOVQ96EZ4 313 aa13.82□□□□□ -0.2
CLCC1-202ENST00000348264 SLC39A13Q96H72 371 aa13.82□□□□□ -0.2
CLCC1-202ENST00000348264 CPXM1Q96SM3 734 aa13.82□□□□□ -0.2
CLCC1-202ENST00000348264 MKRN2Q9H000 416 aaKnown RBP13.82□□□□□ -0.2
CLCC1-202ENST00000348264 SAMSN1Q9NSI8 373 aaKnown RBP13.82□□□□□ -0.2
CLCC1-202ENST00000348264 ABCB8Q9NUT2 735 aa13.82□□□□□ -0.2
CLCC1-202ENST00000348264 PCDHGC3Q9UN70 934 aa13.82□□□□□ -0.2
CLCC1-202ENST00000348264 TLR6Q9Y2C9 796 aa13.82□□□□□ -0.2
CLCC1-202ENST00000348264 NYNRINQ9P2P1 1898 aaKnown RBP13.81□□□□□ -0.2
CLCC1-202ENST00000348264 KCNJ18B7U540 433 aa13.81□□□□□ -0.2
CLCC1-202ENST00000348264 FOXN3O00409 490 aaPredicted RBP13.81□□□□□ -0.2
CLCC1-202ENST00000348264 NPC1O15118 1278 aa13.81□□□□□ -0.2
CLCC1-202ENST00000348264 IRAK2O43187 625 aa13.81□□□□□ -0.2
CLCC1-202ENST00000348264 TBL1XO60907 577 aa13.81□□□□□ -0.2
CLCC1-202ENST00000348264 MOCS2O96007 188 aaPredicted RBP13.81□□□□□ -0.2
CLCC1-202ENST00000348264 CLCN1P35523 988 aa13.81□□□□□ -0.2
CLCC1-202ENST00000348264 SLC11A2P49281 568 aa13.81□□□□□ -0.2
CLCC1-202ENST00000348264 KCNJ12Q14500 433 aa13.81□□□□□ -0.2
CLCC1-202ENST00000348264 TAF5Q15542 800 aa13.81□□□□□ -0.2
CLCC1-202ENST00000348264 PPM1JQ5JR12 505 aa13.81□□□□□ -0.2
CLCC1-202ENST00000348264 LYSMD4Q5XG99 296 aa13.81□□□□□ -0.2
CLCC1-202ENST00000348264 CHST9Q7L1S5 443 aa13.81□□□□□ -0.2
CLCC1-202ENST00000348264 BEND5Q7L4P6 421 aa13.81□□□□□ -0.2
CLCC1-202ENST00000348264 ADIPOR2Q86V24 386 aa13.81□□□□□ -0.2
CLCC1-202ENST00000348264 SLC47A2Q86VL8 602 aa13.81□□□□□ -0.2
CLCC1-202ENST00000348264 DEFB119Q8N690 84 aa13.81□□□□□ -0.2
CLCC1-202ENST00000348264 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.81□□□□□ -0.2
CLCC1-202ENST00000348264 C1orf131Q8NDD1 294 aaKnown RBP13.81□□□□□ -0.2
CLCC1-202ENST00000348264 CYB5D2Q8WUJ1 264 aa13.81□□□□□ -0.2
CLCC1-202ENST00000348264 NUCKS1Q9H1E3 243 aaKnown RBP13.81□□□□□ -0.2
CLCC1-202ENST00000348264 POPDC2Q9HBU9 364 aa13.81□□□□□ -0.2
CLCC1-202ENST00000348264 TMEM74BQ9NUR3 256 aa13.81□□□□□ -0.2
CLCC1-202ENST00000348264 XPO7Q9UIA9 1087 aaKnown RBP13.81□□□□□ -0.2
CLCC1-202ENST00000348264 GGA2Q9UJY4 613 aa13.81□□□□□ -0.2
CLCC1-202ENST00000348264 FHOD1Q9Y613 1164 aa13.81□□□□□ -0.2
CLCC1-202ENST00000348264 PCDH15Q96QU1 1955 aa13.81□□□□□ -0.2
CLCC1-202ENST00000348264 CAPN9O14815 690 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 TM4SF5O14894 197 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 ZBTB24O43167 697 aaPredicted RBP13.8□□□□□ -0.2
CLCC1-202ENST00000348264 AP5Z1O43299 807 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 ZNF217O75362 1048 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 TRUB2O95900 331 aaKnown RBP13.8□□□□□ -0.2
CLCC1-202ENST00000348264 IGLV3-25P01717 112 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 PABPC1P11940 636 aaKnown RBP13.8□□□□□ -0.2
CLCC1-202ENST00000348264 HLA-EP13747 358 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 ITPKAP23677 461 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 CD70P32970 193 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 RPS24P62847 133 aaKnown RBP13.8□□□□□ -0.2
CLCC1-202ENST00000348264 YWHAZP63104 245 aaKnown RBP13.8□□□□□ -0.2
CLCC1-202ENST00000348264 KCNMA1Q12791 1236 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 SPDYCQ5MJ68 293 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 MPP7Q5T2T1 576 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 IL31Q6EBC2 164 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 SERPINA13PQ6UXR4 307 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 SLC36A4Q6YBV0 504 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 RBM43Q6ZSC3 357 aaKnown RBP13.8□□□□□ -0.2
CLCC1-202ENST00000348264 KIAA0907Q7Z7F0 614 aaPredicted RBP13.8□□□□□ -0.2
CLCC1-202ENST00000348264 CACUL1Q86Y37 369 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 SYT12Q8IV01 421 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 SLC41A1Q8IVJ1 513 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 FAM71AQ8IYT1 594 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 HJURPQ8NCD3 748 aaPredicted RBP13.8□□□□□ -0.2
CLCC1-202ENST00000348264 WFIKKN2Q8TEU8 576 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 AZIN2Q96A70 460 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 PPP1R13BQ96KQ4 1090 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 TRIM62Q9BVG3 475 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 PLCB1Q9NQ66 1216 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 NFE2L3Q9Y4A8 694 aa13.8□□□□□ -0.2
CLCC1-202ENST00000348264 EPG5Q9HCE0 2579 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 PES1O00541 588 aaKnown RBP13.79□□□□□ -0.2
CLCC1-202ENST00000348264 KHNYNO15037 678 aaKnown RBP13.79□□□□□ -0.2
CLCC1-202ENST00000348264 GRAP2O75791 330 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 ERBB2P04626 1255 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 EPHX1P07099 455 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 COPAP53621 1224 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 IRX4P78413 519 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 ARID5AQ03989 594 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 PTK2Q05397 1052 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 RAPGEF1Q13905 1077 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 PTPRNQ16849 979 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 PTPN20Q4JDL3 420 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 FNDC3BQ53EP0 1204 aaKnown RBP13.79□□□□□ -0.2
CLCC1-202ENST00000348264 ZC3H12AQ5D1E8 599 aaKnown RBP13.79□□□□□ -0.2
CLCC1-202ENST00000348264 TRIM61Q5EBN2 209 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 TCP11X2Q5H9J9 407 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 MS4A13Q5J8X5 152 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 PEAR1Q5VY43 1037 aaPredicted RBP13.79□□□□□ -0.2
CLCC1-202ENST00000348264 MBLAC2Q68D91 279 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 OLFML1Q6UWY5 402 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 FAM183BPQ6ZVS7 135 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 MFN1Q8IWA4 741 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 AHI1Q8N157 1196 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 ZNF366Q8N895 744 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 LMLNQ96KR4 655 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 HSPA12BQ96MM6 686 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 SLC2A13Q96QE2 648 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 LSM14BQ9BX40 385 aaKnown RBP13.79□□□□□ -0.2
CLCC1-202ENST00000348264 IRX2Q9BZI1 471 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms