RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 ARHGAP44Q17R89 818 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 DUOXA1Q1HG43 343 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 ZNF569Q5MCW4 686 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 CCNI2Q6ZMN8 369 aaPredicted RBP10.19□□□□□ -0.78
MRPL55-204ENST00000348259 DPH6Q7L8W6 267 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 PDZD3Q86UT5 571 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 ZNF677Q86XU0 584 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 SLC41A1Q8IVJ1 513 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 ADGRF2Q8IZF7 708 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 OR5B17Q8NGF7 314 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 CEP76Q8TAP6 659 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 KCNV2Q8TDN2 545 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 ZNF592Q92610 1267 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 TATDN2Q93075 761 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 MYLPFQ96A32 169 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 ANKRD36BP1Q96IX9 119 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 SPACA7Q96KW9 195 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 PNKPQ96T60 521 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 AGPAT1Q99943 283 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.19□□□□□ -0.78
MRPL55-204ENST00000348259 IRX2Q9BZI1 471 aaPredicted RBP10.19□□□□□ -0.78
MRPL55-204ENST00000348259 IMPG2Q9BZV3 1241 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 VRTNQ9H8Y1 702 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 ZDHHC4Q9NPG8 344 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 ITGA11Q9UKX5 1188 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 GUCA1BQ9UMX6 200 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 AGAP1Q9UPQ3 857 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 CKAP5Q14008 2032 aa10.19□□□□□ -0.78
MRPL55-204ENST00000348259 KNL1Q8NG31 2342 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 ATMQ13315 3056 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 CABIN1Q9Y6J0 2220 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 IGHV1OR15-9A0A0B4J2B8 117 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 ARHGAP33O14559 1287 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 RIOK3O14730 519 aaKnown RBP10.18□□□□□ -0.78
MRPL55-204ENST00000348259 HOXC11O43248 304 aaPredicted RBP10.18□□□□□ -0.78
MRPL55-204ENST00000348259 CTIFO43310 598 aaKnown RBP10.18□□□□□ -0.78
MRPL55-204ENST00000348259 GREM1O60565 184 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 HUS1O60921 280 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 PHACTR2O75167 634 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 TACC1O75410 805 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 STAU1O95793 577 aaKnown RBP10.18□□□□□ -0.78
MRPL55-204ENST00000348259 PRLRP16471 622 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 ACO1P21399 889 aaKnown RBP10.18□□□□□ -0.78
MRPL55-204ENST00000348259 TNFAIP3P21580 790 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 LMO2P25791 158 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 PCSK1P29120 753 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 ATICP31939 592 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 TIE1P35590 1138 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 PDE6CP51160 858 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 CACNA2D1P54289 1103 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 SLC14A1Q13336 389 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 CUL2Q13617 745 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 HNRNPDQ14103 355 aaKnown RBP10.18□□□□□ -0.78
MRPL55-204ENST00000348259 EOGTQ5NDL2 527 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 LMBRD2Q68DH5 695 aaPredicted RBP10.18□□□□□ -0.78
MRPL55-204ENST00000348259 DENND5BQ6ZUT9 1274 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 GLRX5Q86SX6 157 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 MIB1Q86YT6 1006 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 SPATA2LQ8IUW3 424 aaPredicted RBP10.18□□□□□ -0.78
MRPL55-204ENST00000348259 MINDY1Q8N5J2 469 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 UBR7Q8N806 425 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 OR2I1PQ8NGU4 316 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 HMGB4Q8WW32 186 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 NAPGQ99747 312 aaPredicted RBP10.18□□□□□ -0.78
MRPL55-204ENST00000348259 SYT15Q9BQS2 421 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 ISCUQ9H1K1 167 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 POLMQ9NP87 494 aaPredicted RBP10.18□□□□□ -0.78
MRPL55-204ENST00000348259 DKK4Q9UBT3 224 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 NOCTQ9UK39 431 aaKnown RBP10.18□□□□□ -0.78
MRPL55-204ENST00000348259 STARD13Q9Y3M8 1113 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 JRKLQ9Y4A0 524 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 SNX9Q9Y5X1 595 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 CPQQ9Y646 472 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 URB1O60287 2271 aaKnown RBP10.18□□□□□ -0.78
MRPL55-204ENST00000348259 ASXL3Q9C0F0 2248 aa10.18□□□□□ -0.78
MRPL55-204ENST00000348259 TCRBV21S2A2A0A5A6 115 aa10.17□□□□□ -0.78
MRPL55-204ENST00000348259 SLC9A3R1O14745 358 aaPredicted RBP10.17□□□□□ -0.78
MRPL55-204ENST00000348259 OPHN1O60890 802 aa10.17□□□□□ -0.78
MRPL55-204ENST00000348259 CST3P01034 146 aaPredicted RBP10.17□□□□□ -0.78
MRPL55-204ENST00000348259 APODP05090 189 aa10.17□□□□□ -0.78
MRPL55-204ENST00000348259 H2AFZP0C0S5 128 aa10.17□□□□□ -0.78
MRPL55-204ENST00000348259 TMEM191BP0C7N4 346 aa10.17□□□□□ -0.78
MRPL55-204ENST00000348259 TMEM253P0C7T8 217 aa10.17□□□□□ -0.78
MRPL55-204ENST00000348259 CYP11B1P15538 503 aa10.17□□□□□ -0.78
MRPL55-204ENST00000348259 WARSP23381 471 aaKnown RBP10.17□□□□□ -0.78
MRPL55-204ENST00000348259 BDNFP23560 247 aa10.17□□□□□ -0.78
MRPL55-204ENST00000348259 PPP3CCP48454 512 aa10.17□□□□□ -0.78
MRPL55-204ENST00000348259 PSMC1P62191 440 aaKnown RBP10.17□□□□□ -0.78
MRPL55-204ENST00000348259 TUBB4BP68371 445 aa10.17□□□□□ -0.78
MRPL55-204ENST00000348259 TFAMQ00059 246 aaKnown RBP10.17□□□□□ -0.78
MRPL55-204ENST00000348259 CDR2Q01850 454 aa10.17□□□□□ -0.78
MRPL55-204ENST00000348259 ZNF33AQ06730 810 aa10.17□□□□□ -0.78
MRPL55-204ENST00000348259 BYSLQ13895 437 aaKnown RBP10.17□□□□□ -0.78
MRPL55-204ENST00000348259 IFI16Q16666 785 aaKnown RBP10.17□□□□□ -0.78
MRPL55-204ENST00000348259 LY6G5CQ5SRR4 150 aa10.17□□□□□ -0.78
MRPL55-204ENST00000348259 PAPD7Q5XG87 772 aaKnown RBP10.17□□□□□ -0.78
MRPL55-204ENST00000348259 PPP1R2P3Q6NXS1 205 aa10.17□□□□□ -0.78
MRPL55-204ENST00000348259 C4orf50Q6ZRC1 276 aa10.17□□□□□ -0.78
MRPL55-204ENST00000348259 H2AFVQ71UI9 128 aa10.17□□□□□ -0.78
MRPL55-204ENST00000348259 SCN4BQ8IWT1 228 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms