RNA–Protein interactions for RNA: ENST00000347739.3

TNFRSF10B-202, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-202ENST00000347739 DDR2Q16832 855 aa23.22■■□□□ 1.31
TNFRSF10B-202ENST00000347739 MSANTD2Q6P1R3 559 aa23.22■■□□□ 1.31
TNFRSF10B-202ENST00000347739 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.22■■□□□ 1.315e-8■■■□□ 17.3
TNFRSF10B-202ENST00000347739 CCDC13Q8IYE1 715 aa23.22■■□□□ 1.31
TNFRSF10B-202ENST00000347739 VPS52Q8N1B4 723 aa23.22■■□□□ 1.31
TNFRSF10B-202ENST00000347739 ANKLE1Q8NAG6 615 aa23.22■■□□□ 1.31
TNFRSF10B-202ENST00000347739 ATAD1Q8NBU5 361 aa23.22■■□□□ 1.31
TNFRSF10B-202ENST00000347739 DIS3LQ8TF46 1054 aaKnown RBP23.22■■□□□ 1.31
TNFRSF10B-202ENST00000347739 BCL7CQ8WUZ0 217 aaPredicted RBP23.22■■□□□ 1.31
TNFRSF10B-202ENST00000347739 RNF34Q969K3 372 aa23.22■■□□□ 1.31
TNFRSF10B-202ENST00000347739 PGLYRP2Q96PD5 576 aa23.22■■□□□ 1.31
TNFRSF10B-202ENST00000347739 NMUR1Q9HB89 426 aa23.22■■□□□ 1.31
TNFRSF10B-202ENST00000347739 COL4A6Q14031 1691 aa23.21■■□□□ 1.31
TNFRSF10B-202ENST00000347739 A0A0A0MRY4 1105 aa23.21■■□□□ 1.31
TNFRSF10B-202ENST00000347739 A0A1W2PQH9 124 aa23.21■■□□□ 1.31
TNFRSF10B-202ENST00000347739 CCR1P32246 355 aa23.21■■□□□ 1.31
TNFRSF10B-202ENST00000347739 GPR15P49685 360 aa23.21■■□□□ 1.31
TNFRSF10B-202ENST00000347739 PGFP49763 221 aa23.21■■□□□ 1.31
TNFRSF10B-202ENST00000347739 IFI35P80217 286 aaPredicted RBP23.21■■□□□ 1.31
TNFRSF10B-202ENST00000347739 PPP2R5DQ14738 602 aa23.21■■□□□ 1.31
TNFRSF10B-202ENST00000347739 SKIDA1Q1XH10 827 aa23.21■■□□□ 1.31
TNFRSF10B-202ENST00000347739 ATP11CQ8NB49 1132 aa23.21■■□□□ 1.31
TNFRSF10B-202ENST00000347739 MCUQ8NE86 351 aa23.21■■□□□ 1.31
TNFRSF10B-202ENST00000347739 PYROXD1Q8WU10 500 aa23.21■■□□□ 1.31
TNFRSF10B-202ENST00000347739 LRRN4Q8WUT4 740 aa23.21■■□□□ 1.31
TNFRSF10B-202ENST00000347739 VWCEQ96DN2 955 aa23.21■■□□□ 1.31
TNFRSF10B-202ENST00000347739 SPATA17Q96L03 361 aa23.21■■□□□ 1.31
TNFRSF10B-202ENST00000347739 SPATA13Q96N96 652 aa23.21■■□□□ 1.31
TNFRSF10B-202ENST00000347739 LGMNQ99538 433 aa23.21■■□□□ 1.31
TNFRSF10B-202ENST00000347739 ETNK1Q9HBU6 452 aa23.21■■□□□ 1.31
TNFRSF10B-202ENST00000347739 EURLQ9NYK6 297 aa23.21■■□□□ 1.31
TNFRSF10B-202ENST00000347739 STK10O94804 968 aaKnown RBP23.2■■□□□ 1.3
TNFRSF10B-202ENST00000347739 TPSB2P20231 275 aa23.2■■□□□ 1.3
TNFRSF10B-202ENST00000347739 PBX3P40426 434 aa23.2■■□□□ 1.3
TNFRSF10B-202ENST00000347739 MMP13P45452 471 aa23.2■■□□□ 1.3
TNFRSF10B-202ENST00000347739 TPSAB1Q15661 275 aa23.2■■□□□ 1.3
TNFRSF10B-202ENST00000347739 RSPO2Q6UXX9 243 aaPredicted RBP23.2■■□□□ 1.3
TNFRSF10B-202ENST00000347739 TDRPQ86YL5 185 aa23.2■■□□□ 1.3
TNFRSF10B-202ENST00000347739 CASP10Q92851 521 aa23.2■■□□□ 1.3
TNFRSF10B-202ENST00000347739 SERPINB11Q96P15 392 aa23.2■■□□□ 1.3
TNFRSF10B-202ENST00000347739 WDR83Q9BRX9 315 aaKnown RBP23.2■■□□□ 1.3
TNFRSF10B-202ENST00000347739 BRD8Q9H0E9 1235 aa23.2■■□□□ 1.3
TNFRSF10B-202ENST00000347739 TMEM39AQ9NV64 488 aa23.2■■□□□ 1.3
TNFRSF10B-202ENST00000347739 COMMD8Q9NX08 183 aa23.2■■□□□ 1.3
TNFRSF10B-202ENST00000347739 ATP11BQ9Y2G3 1177 aa23.2■■□□□ 1.3
TNFRSF10B-202ENST00000347739 CLUHO75153 1309 aa23.2■■□□□ 1.3
TNFRSF10B-202ENST00000347739 BANF1O75531 89 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 LRIG2O94898 1065 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 RTN3O95197 1032 aaPredicted RBP23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 CLTBP09497 229 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 PHBP35232 272 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 SERPINB6P35237 376 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 ALDH7A1P49419 539 aaKnown RBP23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 SEMA5AQ13591 1074 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 CCDC38Q502W7 563 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 SDHAF4Q5VUM1 108 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 ARHGEF18Q6ZSZ5 1173 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 DENND5BQ6ZUT9 1274 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 TAOK1Q7L7X3 1001 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 RNF168Q8IYW5 571 aaPredicted RBP23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 TTC9BQ8N6N2 239 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 FBXO36Q8NEA4 188 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 PRDM12Q9H4Q4 367 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 CWH43Q9H720 699 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 VPS37BQ9H9H4 285 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 FETUBQ9UGM5 382 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 OPHN1O60890 802 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 VNN2O95498 520 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 FDFT1P37268 417 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 GPX6P59796 221 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 GUCY1A3Q02108 690 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 RASA2Q15283 850 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 BBS9Q3SYG4 887 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 ANKRD20A2Q5SQ80 823 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 HP1BP3Q5SSJ5 553 aaPredicted RBP23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 ANKRD20A1Q5TYW2 823 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 ANKRD20A3Q5VUR7 823 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 FBXO46Q6PJ61 603 aaPredicted RBP23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 LEKR1Q6ZMV7 388 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 RNF19BQ6ZMZ0 732 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 TAS1R1Q7RTX1 841 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 ANKMY2Q8IV38 441 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 CCDC33Q8N5R6 958 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 ARMC5Q96C12 935 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 P2RY11Q96G91 374 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 OSER1Q9NX31 292 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 GREB1Q4ZG55 1949 aa23.19■■□□□ 1.3
TNFRSF10B-202ENST00000347739 EXOC1LA0A1B0GW35 172 aa23.18■■□□□ 1.3
TNFRSF10B-202ENST00000347739 SRRM3A6NNA2 597 aaPredicted RBP23.18■■□□□ 1.3
TNFRSF10B-202ENST00000347739 METTL18O95568 372 aa23.18■■□□□ 1.3
TNFRSF10B-202ENST00000347739 APRTP07741 180 aa23.18■■□□□ 1.3
TNFRSF10B-202ENST00000347739 HAPLN1P10915 354 aaPredicted RBP23.18■■□□□ 1.3
TNFRSF10B-202ENST00000347739 EPHB2P29323 1055 aa23.18■■□□□ 1.3
TNFRSF10B-202ENST00000347739 HOXC13P31276 330 aa23.18■■□□□ 1.3
TNFRSF10B-202ENST00000347739 GJA8P48165 433 aa23.18■■□□□ 1.3
TNFRSF10B-202ENST00000347739 PSEN1P49768 467 aa23.18■■□□□ 1.3
TNFRSF10B-202ENST00000347739 USP46P62068 366 aa23.18■■□□□ 1.3
TNFRSF10B-202ENST00000347739 AP1B1Q10567 949 aa23.18■■□□□ 1.3
TNFRSF10B-202ENST00000347739 SFMBT1Q9UHJ3 866 aa23.18■■□□□ 1.3
TNFRSF10B-202ENST00000347739 NEU3Q9UQ49 428 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms