RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 NKIRAS1Q9NYS0 192 aa14.56□□□□□ -0.08
CDK5RAP1-202ENST00000346416 SENP1Q9P0U3 644 aa14.56□□□□□ -0.08
CDK5RAP1-202ENST00000346416 OR12D3Q9UGF7 316 aa14.56□□□□□ -0.08
CDK5RAP1-202ENST00000346416 FAM169AQ9Y6X4 670 aa14.56□□□□□ -0.08
CDK5RAP1-202ENST00000346416 FAM47DPA6NHR8 397 aa14.56□□□□□ -0.08
CDK5RAP1-202ENST00000346416 ANKRD65E5RJM6 399 aa14.56□□□□□ -0.08
CDK5RAP1-202ENST00000346416 RNF103O00237 685 aa14.56□□□□□ -0.08
CDK5RAP1-202ENST00000346416 TNFRSF10BO14763 440 aa14.56□□□□□ -0.08
CDK5RAP1-202ENST00000346416 SPAG6O75602 509 aa14.56□□□□□ -0.08
CDK5RAP1-202ENST00000346416 MSH2P43246 934 aa14.56□□□□□ -0.08
CDK5RAP1-202ENST00000346416 CDK7P50613 346 aa14.56□□□□□ -0.08
CDK5RAP1-202ENST00000346416 GKAP1Q5VSY0 366 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP1-202ENST00000346416 ZNF534Q76KX8 674 aa14.56□□□□□ -0.08
CDK5RAP1-202ENST00000346416 SPATS2Q86XZ4 545 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP1-202ENST00000346416 DBF4BQ8NFT6 615 aa14.56□□□□□ -0.08
CDK5RAP1-202ENST00000346416 SMC6Q96SB8 1091 aa14.56□□□□□ -0.08
CDK5RAP1-202ENST00000346416 FERMT1Q9BQL6 677 aa14.56□□□□□ -0.08
CDK5RAP1-202ENST00000346416 TRIM62Q9BVG3 475 aa14.56□□□□□ -0.08
CDK5RAP1-202ENST00000346416 ZC3H7BQ9UGR2 993 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP1-202ENST00000346416 COL4A4P53420 1690 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 A0A1W2PPM1 405 aa14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 F5H423 210 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 SPAG7O75391 227 aa14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 TADA2AO75478 443 aa14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 STK10O94804 968 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 VIMP08670 466 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 MAGEA3P43357 314 aa14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 GPNMBQ14956 572 aa14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 ARHGEF6Q15052 776 aa14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 KBTBD12Q3ZCT8 623 aa14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 BEND5Q7L4P6 421 aa14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 FAM126BQ8IXS8 530 aa14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 C4orf33Q8N1A6 199 aa14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 COLGALT1Q8NBJ5 622 aa14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 GDAP1Q8TB36 358 aa14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 SH3TC2Q8TF17 1288 aa14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 DCAKDQ8WVC6 231 aa14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 RNF34Q969K3 372 aa14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 CFAP36Q96G28 342 aa14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 SEC16BQ96JE7 1060 aa14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 CEP41Q9BYV8 373 aa14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 ABI2Q9NYB9 513 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 SEPT10Q9P0V9 454 aa14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 SNX10Q9Y5X0 201 aa14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 PATJQ8NI35 1801 aa14.55□□□□□ -0.08
CDK5RAP1-202ENST00000346416 ENPP3O14638 875 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 OPHN1O60890 802 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 COL6A1P12109 1028 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 FDFT1P37268 417 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 GRIA1P42261 906 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 WASHC5Q12768 1159 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 BFSP2Q13515 415 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 MICALCLQ6ZW33 695 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 PDZD4Q76G19 769 aaPredicted RBP14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 SCN4BQ8IWT1 228 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 ABI1Q8IZP0 508 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 NPWQ8N729 165 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 CKAP2Q8WWK9 683 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 LRRC39Q96DD0 335 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 EPAS1Q99814 870 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 ZCWPW1Q9H0M4 648 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 ABCC13Q9NSE7 274 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 GGA2Q9UJY4 613 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 MYO1CO00159 1063 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 PRPF4O43172 522 aaKnown RBP eCLIP14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 LRIG2O94898 1065 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 IGLV3-25P01717 112 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 EPHB2P29323 1055 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 STX2P32856 288 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 PGFP49763 221 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 PRMT2P55345 433 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 BTBD8Q5XKL5 378 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 DCP1BQ8IZD4 617 aaKnown RBP14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 CACNA2D3Q8IZS8 1091 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 SGSM3Q96HU1 749 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 SIGLEC10Q96LC7 697 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 PLAC1Q9HBJ0 212 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 XAB2Q9HCS7 855 aaKnown RBP14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 PCDHB7Q9Y5E2 793 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 NUP205Q92621 2012 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 TET1Q8NFU7 2136 aa14.54□□□□□ -0.08
CDK5RAP1-202ENST00000346416 TCP11X1B4DZS4 312 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 KCNK1O00180 336 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 CPP00450 1065 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 KRT4P19013 534 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 ZNF135P52742 658 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 WDR4P57081 412 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 EIF4EBP2Q13542 120 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 PLEKHG4Q58EX7 1191 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 VARS2Q5ST30 1063 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 PRPF39Q86UA1 669 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 ZNF567Q8N184 647 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 PDCD7Q8N8D1 485 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 MZB1Q8WU39 189 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 ELAC1Q9H777 363 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 SMG5Q9UPR3 1016 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 TTLL3Q9Y4R7 772 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 RAD54BQ9Y620 910 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 MAD1L1Q9Y6D9 718 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms