RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 GOLGA6L10A6NI86 522 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 YJEFN3A6XGL0 299 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 HHLA1C9JL84 531 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 E7ENQ6 273 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 MDM4O15151 490 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 MAP3K6O95382 1288 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 ACSL3O95573 720 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 EOMESO95936 686 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 FYNP06241 537 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 USP17L7P0C7H9 530 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 RBP3P10745 1247 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 SELPP16109 830 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 DESP17661 470 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 BDNFP23560 247 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 L1CAMP32004 1257 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 FAM189BP81408 668 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 PPARDQ03181 441 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 ARHGEF6Q15052 776 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 SLC25A52Q3SY17 297 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 KRT71Q3SY84 523 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 FAM171BQ6P995 826 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 METTL23Q86XA0 190 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 FAM131BQ86XD5 332 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 MAP7D3Q8IWC1 876 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 PYROXD2Q8N2H3 581 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 TAB3Q8N5C8 712 aaPredicted RBP9.58□□□□□ -0.88
ATG4A-202ENST00000345734 PLD5Q8N7P1 536 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 FAM71DQ8N9W8 422 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 BBOF1Q8ND07 529 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.58□□□□□ -0.88
ATG4A-202ENST00000345734 UROC1Q96N76 676 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 PKMYT1Q99640 499 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 ACBD6Q9BR61 282 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 FRMD8P1Q9BZ68 369 aaPredicted RBP9.58□□□□□ -0.88
ATG4A-202ENST00000345734 PCDH9Q9HC56 1237 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 MTMR10Q9NXD2 777 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 PSD3Q9NYI0 1048 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 AP4E1Q9UPM8 1137 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 NAALADL1Q9UQQ1 740 aa9.58□□□□□ -0.88
ATG4A-202ENST00000345734 SMIM23A6NLE4 172 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 DCDC2CA8MYV0 355 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 APOL1O14791 398 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 MCF2LO15068 1137 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 PRMT2P55345 433 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 DAOAP59103 153 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 DAB2P98082 770 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 DSC1Q08554 894 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 TFDP2Q14188 446 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 NOMO1Q15155 1222 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 DPYSL2Q16555 572 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 TCTN1Q2MV58 587 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 NOMO2Q5JPE7 1267 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 RAB41Q5JT25 222 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 OVOS1Q6IE37 1185 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 STRADAQ7RTN6 431 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 SRLQ86TD4 932 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 FAM126BQ8IXS8 530 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 CCHCR1Q8TD31 782 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 RSAD2Q8WXG1 361 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 P3H4Q92791 437 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 FAF2Q96CS3 445 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 SMARCD1Q96GM5 515 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 SLC2A13Q96QE2 648 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 TBC1D13Q9NVG8 400 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 DNAJB4Q9UDY4 337 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 TPX2Q9ULW0 747 aaKnown RBP9.57□□□□□ -0.88
ATG4A-202ENST00000345734 HEY1Q9Y5J3 304 aa9.57□□□□□ -0.88
ATG4A-202ENST00000345734 MYO18AQ92614 2054 aaKnown RBP9.57□□□□□ -0.88
ATG4A-202ENST00000345734 HMGB1P1B2RPK0 211 aaPredicted RBP9.56□□□□□ -0.88
ATG4A-202ENST00000345734 M0QYT0 321 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 DNM1LO00429 736 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 CYP2F1P24903 491 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 RPL22P35268 128 aaKnown RBP9.56□□□□□ -0.88
ATG4A-202ENST00000345734 MAGEA9P43362 315 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 GATMP50440 423 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 EIF3BP55884 814 aaKnown RBP9.56□□□□□ -0.88
ATG4A-202ENST00000345734 NME3Q13232 169 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 KYNUQ16719 465 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 RNASEH2BQ5TBB1 312 aaKnown RBP9.56□□□□□ -0.88
ATG4A-202ENST00000345734 ANKRD22Q5VYY1 191 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 SLC9A4Q6AI14 798 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 TTC19Q6DKK2 380 aaPredicted RBP9.56□□□□□ -0.88
ATG4A-202ENST00000345734 MRPL14Q6P1L8 145 aaKnown RBP9.56□□□□□ -0.88
ATG4A-202ENST00000345734 DARS2Q6PI48 645 aaKnown RBP9.56□□□□□ -0.88
ATG4A-202ENST00000345734 TRMT10CQ7L0Y3 403 aaKnown RBP9.56□□□□□ -0.88
ATG4A-202ENST00000345734 LYSMD3Q7Z3D4 306 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 COLGALT2Q8IYK4 626 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 ZCCHC9Q8N567 271 aaKnown RBP9.56□□□□□ -0.88
ATG4A-202ENST00000345734 DBF4BQ8NFT6 615 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 EPS8L3Q8TE67 593 aaKnown RBP9.56□□□□□ -0.88
ATG4A-202ENST00000345734 NT5C3BQ969T7 300 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 DEFB118Q96PH6 123 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 NPY6RQ99463 290 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 ZNF670Q9BS34 389 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 NRDE2Q9H7Z3 1164 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 POPDC2Q9HBU9 364 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 NINJ2Q9NZG7 142 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 DSEQ9UL01 958 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 PRG3Q9Y2Y8 225 aaPredicted RBP9.56□□□□□ -0.88
ATG4A-202ENST00000345734 MFHAS1Q9Y4C4 1052 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms