RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 POLG2Q9UHN1 485 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 ALOX15BO15296 676 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 VPS4BO75351 444 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 HK2P52789 917 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 DPYSQ14117 519 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 PPP1R15BQ5SWA1 713 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 ADGRA1Q86SQ6 560 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 SELENONQ9NZV5 590 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 CCDC167Q9P0B6 97 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 TRMT6Q9UJA5 497 aaKnown RBP18.5■□□□□ 0.55
SMC4-201ENST00000344722 IPPQ9Y573 584 aa18.5■□□□□ 0.55
SMC4-201ENST00000344722 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.5■□□□□ 0.55
SMC4-201ENST00000344722 PTGES3LE9PB15 166 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 TPP1O14773 563 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 CHRM3P20309 590 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 TKTP29401 623 aaKnown RBP18.49■□□□□ 0.55
SMC4-201ENST00000344722 LRPAP1P30533 357 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 RECQLP46063 649 aaPredicted RBP18.49■□□□□ 0.55
SMC4-201ENST00000344722 PLIN5Q00G26 463 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 IL17AQ16552 155 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 PERM1Q5SV97 790 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 ST13P5Q8NFI4 369 aaPredicted RBP18.49■□□□□ 0.55
SMC4-201ENST00000344722 GPRASP2Q96D09 838 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 WDR12Q9GZL7 423 aaKnown RBP18.49■□□□□ 0.55
SMC4-201ENST00000344722 H3BNX3 289 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 HS6ST1O60243 411 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 PMPCBO75439 489 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 ITGAVP06756 1048 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 MAPK1P28482 360 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 NAMPTP43490 491 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 MARCKSL1P49006 195 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 NR2C2P49116 596 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 TKFCQ3LXA3 575 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 GPR107Q5VW38 600 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 ARMC3Q5W041 872 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 TTC23Q5W5X9 447 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 KCNK18Q7Z418 384 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 PALB2Q86YC2 1186 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 ACMSDQ8TDX5 336 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 LRFN2Q9ULH4 789 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 SQORQ9Y6N5 450 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 CASP7P55210 303 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 SPP2Q13103 211 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 MSLNQ13421 630 aaPredicted RBP18.49■□□□□ 0.55
SMC4-201ENST00000344722 TRIQKQ629K1 86 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 LPCAT4Q643R3 524 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 PTRHD1Q6GMV3 140 aaKnown RBP18.49■□□□□ 0.55
SMC4-201ENST00000344722 KIAA1841Q6NSI8 718 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 KCNMB4Q86W47 210 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 KRT73Q86Y46 540 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 ZSWIM2Q8NEG5 633 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 ENKURQ8TC29 256 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 DCUN1D1Q96GG9 259 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 BTBD3Q9Y2F9 522 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 PIGNO95427 931 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 ZNF682O95780 498 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 PIK3R1P27986 724 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 ILF2Q12905 390 aaKnown RBP18.49■□□□□ 0.55
SMC4-201ENST00000344722 C1DQ13901 141 aaKnown RBP18.49■□□□□ 0.55
SMC4-201ENST00000344722 PCDH20Q8N6Y1 951 aaKnown RBP18.49■□□□□ 0.55
SMC4-201ENST00000344722 FAM120BQ96EK7 910 aaKnown RBP18.49■□□□□ 0.55
SMC4-201ENST00000344722 UBXN6Q9BZV1 441 aa18.49■□□□□ 0.55
SMC4-201ENST00000344722 FRMPD4Q14CM0 1322 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 M0QYT0 321 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 KRT6BP04259 564 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 MGAT1P26572 445 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 KRT6CP48668 564 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 SERPINH1P50454 418 aaKnown RBP18.48■□□□□ 0.55
SMC4-201ENST00000344722 PSME3P61289 254 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 C16orf46Q6P387 395 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 SEPT12Q8IYM1 358 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 FIG4Q92562 907 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 DDX3YO15523 660 aaKnown RBP18.48■□□□□ 0.55
SMC4-201ENST00000344722 ATG7O95352 703 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 TGDSO95455 350 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 RRM2P31350 389 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 CDC42EP1Q00587 391 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 A0A0B4J269 797 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 PSMD12O00232 456 aaPredicted RBP18.48■□□□□ 0.55
SMC4-201ENST00000344722 MATN2O00339 956 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 NCAM2O15394 837 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 C6orf222P0C671 652 aaPredicted RBP18.48■□□□□ 0.55
SMC4-201ENST00000344722 SV2CQ496J9 727 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 CHID1Q9BWS9 393 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 CLEC4MQ9H2X3 399 aaPredicted RBP18.48■□□□□ 0.55
SMC4-201ENST00000344722 SYTL2Q9HCH5 934 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 ITGA11Q9UKX5 1188 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 NWD1Q149M9 1564 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 VCLP18206 1134 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 DLG4P78352 724 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 SPAG4Q9NPE6 437 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 GGA3Q9NZ52 723 aa18.48■□□□□ 0.55
SMC4-201ENST00000344722 ITSN1Q15811 1721 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 CSPG5O95196 566 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 GLRA2P23416 452 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 GNL1P36915 607 aaPredicted RBP18.47■□□□□ 0.55
SMC4-201ENST00000344722 CD151P48509 253 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 NPY2RP49146 381 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 USP46P62068 366 aa18.47■□□□□ 0.55
SMC4-201ENST00000344722 KRT33BQ14525 404 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms