RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 BCS1LQ9Y276 419 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 UBA6A0AVT1 1052 aaPredicted RBP13.94□□□□□ -0.18
TRIO-202ENST00000344204 DCDC2CA8MYV0 355 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 ERVV-2B6SEH9 535 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 ARIH2O95376 493 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 CYP2D6P10635 497 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 SNRNP35Q16560 246 aaKnown RBP13.94□□□□□ -0.18
TRIO-202ENST00000344204 DENND1BQ6P3S1 775 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 MIER2Q8N344 545 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 UGT2B28Q9BY64 529 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 VAV3Q9UKW4 847 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 MRASO14807 208 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 H6PDO95479 791 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 MXD4Q14582 209 aaPredicted RBP13.94□□□□□ -0.18
TRIO-202ENST00000344204 CACHD1Q5VU97 1274 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 TTC23Q5W5X9 447 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 GJB7Q6PEY0 223 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 BPIFB6Q8NFQ5 453 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 ERVK-11Q9UQG0 969 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 RGSL1A5PLK6 1076 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 E7ENX8 843 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 FOSL2P15408 326 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 RRM2P31350 389 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 PDCD10Q9BUL8 212 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 USP12O75317 370 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 VAPBO95292 243 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 CYP11B1P15538 503 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 STRA8Q7Z7C7 330 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 ERLEC1Q96DZ1 483 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 PPP1R10Q96QC0 940 aaKnown RBP13.94□□□□□ -0.18
TRIO-202ENST00000344204 SLC4A5Q9BY07 1137 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 GARTP22102 1010 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 NMT1P30419 496 aaKnown RBP13.94□□□□□ -0.18
TRIO-202ENST00000344204 HOXD12P35452 270 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 SEPHS1P49903 392 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 BCAP31P51572 246 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 LDLRAP1Q5SW96 308 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 RFWD3Q6PCD5 774 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 GPD1LQ8N335 351 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 NEXMIFQ5QGS0 1516 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 SCN9AQ15858 1988 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 EDF1O60869 148 aaKnown RBP13.93□□□□□ -0.18
TRIO-202ENST00000344204 SLC20A1Q8WUM9 679 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 FIG4Q92562 907 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 SIPA1Q96FS4 1042 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 IFT43Q96FT9 208 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 SLC39A3Q9BRY0 314 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 CDH9Q9ULB4 789 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 DUSP12Q9UNI6 340 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 PNPLA7Q6ZV29 1317 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 INO80B-WBP1J3KQ70 363 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 PSMD12O00232 456 aaPredicted RBP13.93□□□□□ -0.18
TRIO-202ENST00000344204 TMCC2O75069 709 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 GNG2P59768 71 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 DUPD1Q68J44 220 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 OR8H1Q8NGG4 311 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 INO80BQ9C086 356 aaPredicted RBP13.93□□□□□ -0.18
TRIO-202ENST00000344204 CXorf21Q9HAI6 301 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 WARSP23381 471 aaKnown RBP13.93□□□□□ -0.18
TRIO-202ENST00000344204 UBXN2AP68543 259 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 PIWIL2Q8TC59 973 aaKnown RBP13.93□□□□□ -0.18
TRIO-202ENST00000344204 DHRS12A0PJE2 317 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 ATP6AP1LQ52LC2 224 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 TMEM121Q9BTD3 319 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 CARTPTQ16568 116 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 CDH22Q9UJ99 828 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 RPS8P62241 208 aaKnown RBP13.93□□□□□ -0.18
TRIO-202ENST00000344204 ADHFE1Q8IWW8 467 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 ITFG1Q8TB96 612 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 PLEKHO2Q8TD55 490 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 PEX11AO75192 247 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 PSME3P61289 254 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 SQLEQ14534 574 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 TFB1MQ8WVM0 346 aaKnown RBP13.93□□□□□ -0.18
TRIO-202ENST00000344204 CCDC17Q96LX7 622 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 DNAJB4Q9UDY4 337 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 ZNF37AP17032 561 aaPredicted RBP13.93□□□□□ -0.18
TRIO-202ENST00000344204 BICRALQ6AI39 1079 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 WDR59Q6PJI9 974 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 LINC00523Q86TU6 105 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 TMEM8AQ9HCN3 771 aa13.93□□□□□ -0.18
TRIO-202ENST00000344204 LRRC10BA6NIK2 292 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 ATF6P18850 670 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 TGFBR2P37173 567 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 ELK3P41970 407 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 NAB1Q13506 487 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 SLC22A9Q8IVM8 553 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 DMRTB1Q96MA1 342 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 TMEM47Q9BQJ4 181 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 H2AFY2Q9P0M6 372 aaPredicted RBP13.92□□□□□ -0.18
TRIO-202ENST00000344204 LNPEPQ9UIQ6 1025 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 ANKRD13AQ8IZ07 590 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 PHF12Q96QT6 1004 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 SPAG4Q9NPE6 437 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 CD3EAPO15446 510 aaKnown RBP13.92□□□□□ -0.18
TRIO-202ENST00000344204 FYNP06241 537 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 CDK8P49336 464 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 RBM15BQ8NDT2 890 aaKnown RBP13.92□□□□□ -0.18
TRIO-202ENST00000344204 AGAP3Q96P47 875 aa13.92□□□□□ -0.18
TRIO-202ENST00000344204 EHD1Q9H4M9 534 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms