RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 SARNPP82979 210 aaKnown RBP15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 BST1Q10588 318 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 MAP2K5Q13163 448 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 CTC1Q2NKJ3 1217 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 FAM72AQ5TYM5 149 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 FAM72DQ6L9T8 149 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 ARCQ7LC44 396 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 FAM72BQ86X60 149 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 ZNF398Q8TD17 642 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 KCNV2Q8TDN2 545 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 LPPQ93052 612 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 PGBD4Q96DM1 585 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 AGAP3Q96P47 875 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 ULBP1Q9BZM6 244 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 DNAI2Q9GZS0 605 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 AP5M1Q9H0R1 490 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 DDX43Q9NXZ2 648 aaKnown RBP15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 ARMCX1Q9P291 453 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 MCM8Q9UJA3 840 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 MAGED2Q9UNF1 606 aaPredicted RBP15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 EEF2KO00418 725 aaKnown RBP15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 STK10O94804 968 aaKnown RBP15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 F7P08709 466 aaPredicted RBP15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 CTSHP09668 335 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 NOS2P35228 1153 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 CRYBB1P53674 252 aaPredicted RBP15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 XKR4Q5GH76 650 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 ALYREFQ86V81 257 aaKnown RBP15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 NUDCD3Q8IVD9 361 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 TOP6BLQ8N6T0 577 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 FAM13CQ8NE31 585 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 INPP5DQ92835 1189 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 KCNK16Q96T55 309 aa15.34■□□□□ 0.05
VIPAS39-202ENST00000343765 E2F8A0AVK6 867 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 USP12O75317 370 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 AMHP03971 560 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 FAM200BP0CF97 657 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 CCND1P24385 295 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 CPT1AP50416 773 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 CDK16Q00536 496 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 C16orf46Q6P387 395 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 GPRIN1Q7Z2K8 1008 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 ARID3BQ8IVW6 561 aaPredicted RBP15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 E2F7Q96AV8 911 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 NPY6RQ99463 290 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 CRTAC1Q9NQ79 661 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 STAP1Q9ULZ2 295 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 YJEFN3A6XGL0 299 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 E7ENQ6 273 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 DIAPH2O60879 1101 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 FDFT1P37268 417 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 RASSF2P50749 326 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 PARP6Q2NL67 630 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 RFX8Q6ZV50 586 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 ZNF567Q8N184 647 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 C2orf69Q8N8R5 385 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 GIMAP7Q8NHV1 300 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 NSMCE1Q8WV22 266 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 WNT8BQ93098 351 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 SENP8Q96LD8 212 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 GAD1Q99259 594 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 RHOBTB2Q9BYZ6 727 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 ANLNQ9NQW6 1124 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 SYBUQ9NX95 663 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 NKX1-2Q9UD57 310 aaPredicted RBP15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 GTF2IRD1Q9UHL9 959 aa15.33■□□□□ 0.04
VIPAS39-202ENST00000343765 SDR42E2A6NKP2 422 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 HACD1B0YJ81 288 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 HAS3O00219 553 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 AP1G2O75843 785 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 GSTA2P09210 222 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 USP17L7P0C7H9 530 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 GMPRP36959 345 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 CCNFP41002 786 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 CACNA2D1P54289 1103 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 MORN1Q5T089 497 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 BZW1Q7L1Q6 419 aaKnown RBP15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 PID1Q7Z2X4 250 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 LIMS2Q7Z4I7 341 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 GPATCH11Q8N954 259 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 MTBPQ96DY7 904 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 MIPEPQ99797 713 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 NOP53Q9NZM5 478 aaKnown RBP15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 SNX10Q9Y5X0 201 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 PSAT1Q9Y617 370 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 MYBPHLA2RUH7 354 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 H0Y3Z8 333 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 GM2AP17900 193 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 PTPN4P29074 926 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 WASHC5Q12768 1159 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 SKA1Q96BD8 255 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 PPP1R10Q96QC0 940 aaKnown RBP15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 TSPYL2Q9H2G4 693 aaPredicted RBP15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 TMEM30AQ9NV96 361 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 MOCS1Q9NZB8 636 aa15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 KLHL8Q9P2G9 620 aaPredicted RBP15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 MTO1Q9Y2Z2 717 aaKnown RBP15.32■□□□□ 0.04
VIPAS39-202ENST00000343765 ZNF638Q14966 1978 aaKnown RBP15.31■□□□□ 0.04
VIPAS39-202ENST00000343765 MYADML2A6NDP7 307 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms