RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 NAT14Q8WUY8 206 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 HTR3CQ8WXA8 447 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 COPS5Q92905 334 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 EFCAB1Q9HAE3 211 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 PIDD1Q9HB75 910 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 ARHGEF3Q9NR81 526 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 DDX43Q9NXZ2 648 aaKnown RBP8.27□□□□□ -1.09
UBE4B-202ENST00000343090 ITGA11Q9UKX5 1188 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 ACOT9Q9Y305 439 aa8.27□□□□□ -1.09
UBE4B-202ENST00000343090 AAR2Q9Y312 384 aaKnown RBP8.27□□□□□ -1.09
UBE4B-202ENST00000343090 NR5A2O00482 541 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 RGL2O15211 777 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 STX7O15400 261 aaKnown RBP8.26□□□□□ -1.09
UBE4B-202ENST00000343090 FGRP09769 529 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 CCNFP41002 786 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 STX5Q13190 355 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 GRIK4Q16099 956 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 DUPD1Q68J44 220 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 TTC33Q6PID6 262 aaPredicted RBP8.26□□□□□ -1.09
UBE4B-202ENST00000343090 ECHDC2Q86YB7 292 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 MIER2Q8N344 545 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 OR5B17Q8NGF7 314 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 C17orf50Q8WW18 174 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 PRPF18Q99633 342 aaKnown RBP8.26□□□□□ -1.09
UBE4B-202ENST00000343090 HSD17B14Q9BPX1 270 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 NKX1-2Q9UD57 310 aaPredicted RBP8.26□□□□□ -1.09
UBE4B-202ENST00000343090 CNTNAP2Q9UHC6 1331 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 RNF103O00237 685 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 ZNF197O14709 1029 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 TBC1D4O60343 1298 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 POMCP01189 267 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 TPBGLP0DKB5 382 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 SERPINB1P30740 379 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 HOXA10P31260 410 aaPredicted RBP8.26□□□□□ -1.09
UBE4B-202ENST00000343090 RAP1GDS1P52306 607 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 C21orf59P57076 290 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 TAS2R40P59535 323 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 MMRN1Q13201 1228 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 CCDC85BQ15834 202 aaPredicted RBP8.26□□□□□ -1.09
UBE4B-202ENST00000343090 TFAP2DQ7Z6R9 452 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 DEFB106AQ8N104 65 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 SAMD3Q8N6K7 520 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 NETO2Q8NC67 525 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 THUMPD3Q9BV44 507 aaKnown RBP8.26□□□□□ -1.09
UBE4B-202ENST00000343090 FHDC1Q9C0D6 1143 aaPredicted RBP8.26□□□□□ -1.09
UBE4B-202ENST00000343090 DENND2DQ9H6A0 471 aaPredicted RBP8.26□□□□□ -1.09
UBE4B-202ENST00000343090 SPON1Q9HCB6 807 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 GPAMQ9HCL2 828 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 EURLQ9NYK6 297 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 PCYOX1Q9UHG3 505 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 FARP1Q9Y4F1 1045 aaPredicted RBP8.26□□□□□ -1.09
UBE4B-202ENST00000343090 ACKR2O00590 384 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 NOL4O94818 638 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 LCA5LO95447 670 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 GJB1P08034 283 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 HGSNATQ68CP4 663 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 MROH7Q68CQ1 1323 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 OR6Y1Q8NGX8 325 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 ZFAND2BQ8WV99 257 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 PCDHB18PQ96TA0 734 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 CPA4Q9UI42 421 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 FOXO6A8MYZ6 492 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 ADCY6O43306 1168 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 LIASO43766 372 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 CLASP2O75122 1294 aaKnown RBP8.26□□□□□ -1.09
UBE4B-202ENST00000343090 DDNO94850 711 aaPredicted RBP8.26□□□□□ -1.09
UBE4B-202ENST00000343090 UBA1P22314 1058 aaKnown RBP8.26□□□□□ -1.09
UBE4B-202ENST00000343090 NCKAP1LP55160 1127 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 RTP1P59025 263 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 AGKQ53H12 422 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.26□□□□□ -1.09
UBE4B-202ENST00000343090 PHACTR1Q9C0D0 580 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 PORCNQ9H237 461 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 MROH8Q9H579 483 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 TRMT6Q9UJA5 497 aaKnown RBP8.26□□□□□ -1.09
UBE4B-202ENST00000343090 FER1L4A9Z1Z3 1794 aa8.26□□□□□ -1.09
UBE4B-202ENST00000343090 FAM237BA0A1B0GVD1 139 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 ERI2A8K979 691 aaKnown RBP8.25□□□□□ -1.09
UBE4B-202ENST00000343090 ADM5C9JUS6 153 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 TSPAN3O60637 253 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 CYBBP04839 570 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 THP07101 528 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 NFICP08651 508 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 ERVK-10P10266 1014 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 RPL5P46777 297 aaKnown RBP8.25□□□□□ -1.09
UBE4B-202ENST00000343090 CDK16Q00536 496 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 PTK2BQ14289 1009 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 ZPBP2Q6X784 338 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 PLEKHH3Q7Z736 793 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 ATP6V0D2Q8N8Y2 350 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 GIPC3Q8TF64 312 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 JADE3Q92613 823 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 ART4Q93070 314 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 FBXO32Q969P5 355 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 UBE2OQ9C0C9 1292 aaKnown RBP8.25□□□□□ -1.09
UBE4B-202ENST00000343090 TCF7L2Q9NQB0 619 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 RIC8BQ9NVN3 520 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 RBM22Q9NW64 420 aaKnown RBP eCLIP8.25□□□□□ -1.094e-7■■■■□ 22.3
UBE4B-202ENST00000343090 DAPK2Q9UIK4 370 aa8.25□□□□□ -1.09
UBE4B-202ENST00000343090 NUDT5Q9UKK9 219 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms