RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 WASHC2DQ5SRD0 308 aa18.02■□□□□ 0.47
SMAD4-201ENST00000342988 PRR23BQ6ZRT6 265 aa18.02■□□□□ 0.47
SMAD4-201ENST00000342988 GNPTGQ9UJJ9 305 aa18.02■□□□□ 0.47
SMAD4-201ENST00000342988 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 SAGE2PA6NJ88 616 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 F5H5T6 163 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 BMT2Q1RMZ1 405 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 R3HDM2Q9Y2K5 976 aaKnown RBP18.01■□□□□ 0.47
SMAD4-201ENST00000342988 PLIN3O60664 434 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 PSIP1O75475 530 aaKnown RBP18.01■□□□□ 0.47
SMAD4-201ENST00000342988 HOXB6P17509 224 aaKnown RBP18.01■□□□□ 0.47
SMAD4-201ENST00000342988 NCOA4Q13772 614 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 PSMD5Q16401 504 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.01■□□□□ 0.47
SMAD4-201ENST00000342988 EYA1Q99502 592 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 CDADC1Q9BWV3 514 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 GMIPQ9P107 970 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 NCF1BA6NI72 391 aaPredicted RBP18.01■□□□□ 0.47
SMAD4-201ENST00000342988 NCF1CA8MVU1 366 aaPredicted RBP18.01■□□□□ 0.47
SMAD4-201ENST00000342988 SGTAO43765 313 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 NCF1P14598 390 aaPredicted RBP18.01■□□□□ 0.47
SMAD4-201ENST00000342988 AVPR1AP37288 418 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 PNPLA4P41247 253 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 GEMP55040 296 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 WDR72Q3MJ13 1102 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 RAB23Q9ULC3 237 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 SLC9A8Q9Y2E8 581 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 OLR1P78380 273 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 TCEAL6Q6IPX3 200 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 IZUMO2Q6UXV1 221 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 TCAIMQ8N3R3 496 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 SPATA9Q9BWV2 254 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 OSGEPL1Q9H4B0 414 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 ANKRD6Q9Y2G4 727 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 NSUN7Q8NE18 718 aaKnown RBP18.01■□□□□ 0.47
SMAD4-201ENST00000342988 OR6Y1Q8NGX8 325 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 WHRNQ9P202 907 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 HEY2Q9UBP5 337 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 TTLL13PA6NNM8 815 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.01■□□□□ 0.47
SMAD4-201ENST00000342988 GABBR1Q9UBS5 961 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 SCAF8Q9UPN6 1271 aaKnown RBP18.01■□□□□ 0.47
SMAD4-201ENST00000342988 EURLQ9NYK6 297 aa18.01■□□□□ 0.47
SMAD4-201ENST00000342988 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.01■□□□□ 0.471e-32■■■■■ 34.6
SMAD4-201ENST00000342988 ITGB6P18564 788 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 CDH3P22223 829 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 RPL3P39023 403 aaKnown RBP18■□□□□ 0.47
SMAD4-201ENST00000342988 CDC42P60953 191 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 TYSND1Q2T9J0 566 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 C8orf59Q8N0T1 100 aaPredicted RBP18■□□□□ 0.47
SMAD4-201ENST00000342988 PLA2G4CQ9UP65 541 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 MAGEB16A2A368 324 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 PCCAP05165 728 aaPredicted RBP18■□□□□ 0.47
SMAD4-201ENST00000342988 DALRD3Q5D0E6 543 aaKnown RBP18■□□□□ 0.47
SMAD4-201ENST00000342988 ANO7Q6IWH7 933 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 COL23A1Q86Y22 540 aaPredicted RBP18■□□□□ 0.47
SMAD4-201ENST00000342988 CBWD2Q8IUF1 395 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 DLG3Q92796 817 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 SLC33A1O00400 549 aaPredicted RBP18■□□□□ 0.47
SMAD4-201ENST00000342988 PARNO95453 639 aaKnown RBP18■□□□□ 0.47
SMAD4-201ENST00000342988 ITGALP20701 1170 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 SAMD4BQ5PRF9 694 aaKnown RBP18■□□□□ 0.47
SMAD4-201ENST00000342988 SLC4A11Q8NBS3 891 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 ACTR8Q9H981 624 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 MED24O75448 989 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 OTUD3Q5T2D3 398 aaPredicted RBP18■□□□□ 0.47
SMAD4-201ENST00000342988 GRPEL2Q8TAA5 225 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 BSDC1Q9NW68 430 aaPredicted RBP18■□□□□ 0.47
SMAD4-201ENST00000342988 CLASP1Q7Z460 1538 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 RGSL1A5PLK6 1076 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 GLP2RO95838 553 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 GPD1P21695 349 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 GLB1LQ6UWU2 654 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 ATCAYQ86WG3 371 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 TMIEQ8NEW7 156 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 CCSER1Q9C0I3 900 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 MAGEB2O15479 319 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 TLX1P31314 330 aaPredicted RBP18■□□□□ 0.47
SMAD4-201ENST00000342988 ALDH7A1P49419 539 aaKnown RBP18■□□□□ 0.47
SMAD4-201ENST00000342988 SPIDRQ14159 915 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 ERBB4Q15303 1308 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 MROH7Q68CQ1 1323 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 MNDAP41218 407 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 RIPK1Q13546 671 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 DHFR2Q86XF0 187 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 SGCDQ92629 289 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 INVSQ9Y283 1065 aa18■□□□□ 0.47
SMAD4-201ENST00000342988 KCNH1O95259 989 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 SEC24AO95486 1093 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 CASP5P51878 434 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 INO80EQ8NBZ0 244 aaPredicted RBP17.99■□□□□ 0.47
SMAD4-201ENST00000342988 ITFG1Q8TB96 612 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 PTCD2Q8WV60 388 aaKnown RBP17.99■□□□□ 0.47
SMAD4-201ENST00000342988 CKAP2Q8WWK9 683 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 MEMO1Q9Y316 297 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 H0YJX3 145 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 NCAM2O15394 837 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 ADD2P35612 726 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 OXCT1P55809 520 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 CORO7P57737 925 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms