RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 MCRS1Q96EZ8 462 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 CDY1Q9Y6F8 540 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 hCG_1818297A0A087WSY0 165 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 HGSO14964 777 aaPredicted RBP13.49□□□□□ -0.25
COL18A1-201ENST00000342220 OAS1P00973 400 aaKnown RBP13.49□□□□□ -0.25
COL18A1-201ENST00000342220 IMPDH2P12268 514 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 BRAFP15056 766 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 HDAC4P56524 1084 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 EFEMP1Q12805 493 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 TCTN1Q2MV58 587 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 VARS2Q5ST30 1063 aaKnown RBP13.49□□□□□ -0.25
COL18A1-201ENST00000342220 UNC45BQ8IWX7 931 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 REM2Q8IYK8 340 aaPredicted RBP13.49□□□□□ -0.25
COL18A1-201ENST00000342220 PLEKHG4BQ96PX9 1271 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 YME1L1Q96TA2 773 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 ETNK2Q9NVF9 386 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 GDAP2Q9NXN4 497 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 STAP1Q9ULZ2 295 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 MAD1L1Q9Y6D9 718 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 CDKN2BP42772 138 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 SLC11A1P49279 550 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 MCCD1P59942 119 aaPredicted RBP13.49□□□□□ -0.25
COL18A1-201ENST00000342220 BLMHQ13867 455 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 BTG3Q14201 252 aaPredicted RBP13.49□□□□□ -0.25
COL18A1-201ENST00000342220 DBN1Q16643 649 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 PPP1R15BQ5SWA1 713 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 CRYBG2Q8N1P7 616 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 SMARCD1Q96GM5 515 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 GORASP1Q9BQQ3 440 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 UBP1Q9NZI7 540 aa13.49□□□□□ -0.25
COL18A1-201ENST00000342220 ZSCAN9O15535 394 aaPredicted RBP13.48□□□□□ -0.25
COL18A1-201ENST00000342220 APRTP07741 180 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 IRF1P10914 325 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 CST5P28325 142 aaPredicted RBP13.48□□□□□ -0.25
COL18A1-201ENST00000342220 EPHB2P29323 1055 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 MRPS5P82675 430 aaKnown RBP13.48□□□□□ -0.25
COL18A1-201ENST00000342220 TRIM71Q2Q1W2 868 aaKnown RBP13.48□□□□□ -0.25
COL18A1-201ENST00000342220 DCLRE1AQ6PJP8 1040 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 GRK7Q8WTQ7 553 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 TEKT4Q8WW24 435 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 LGMNQ99538 433 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 TRAIPQ9BWF2 469 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 RAB6BQ9NRW1 208 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 LRPAP1P30533 357 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 OR1D2P34982 312 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 PGFP49763 221 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 KCNJ2P63252 427 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 CUL3Q13618 768 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 EFHC1Q5JVL4 640 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 PPP1R2P3Q6NXS1 205 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 TFAP2DQ7Z6R9 452 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 SRRM1Q8IYB3 904 aaKnown RBP13.48□□□□□ -0.25
COL18A1-201ENST00000342220 ZBED8Q8IZ13 594 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 MAIP1Q8WWC4 291 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 SMPD4Q9NXE4 827 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 DDX56Q9NY93 547 aaKnown RBP13.48□□□□□ -0.25
COL18A1-201ENST00000342220 MYO18AQ92614 2054 aaKnown RBP13.48□□□□□ -0.25
COL18A1-201ENST00000342220 DPPA5A6NC42 116 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 TRDMT1O14717 391 aaKnown RBP13.48□□□□□ -0.25
COL18A1-201ENST00000342220 APOL1O14791 398 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 LTFP02788 710 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 RBL1P28749 1068 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 HOXC8P31273 242 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 POLE2P56282 527 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 NCALDP61601 193 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 SLC25A11Q02978 314 aaKnown RBP13.48□□□□□ -0.25
COL18A1-201ENST00000342220 KCNV2Q8TDN2 545 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 CKAP2Q8WWK9 683 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 HNRNPABQ99729 332 aaKnown RBP13.48□□□□□ -0.25
COL18A1-201ENST00000342220 MMADHCQ9H3L0 296 aaPredicted RBP13.48□□□□□ -0.25
COL18A1-201ENST00000342220 WDCPQ9H6R7 721 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 ECT2Q9H8V3 914 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 PRKAG2Q9UGJ0 569 aa13.48□□□□□ -0.25
COL18A1-201ENST00000342220 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.47□□□□□ -0.25
COL18A1-201ENST00000342220 XPO1O14980 1071 aaKnown RBP13.47□□□□□ -0.25
COL18A1-201ENST00000342220 ATP5DP30049 168 aa13.47□□□□□ -0.25
COL18A1-201ENST00000342220 RPL9P32969 192 aaKnown RBP13.47□□□□□ -0.25
COL18A1-201ENST00000342220 MAN1A1P33908 653 aa13.47□□□□□ -0.25
COL18A1-201ENST00000342220 SLC5A3P53794 718 aa13.47□□□□□ -0.25
COL18A1-201ENST00000342220 INTS6LQ5JSJ4 861 aaKnown RBP13.47□□□□□ -0.25
COL18A1-201ENST00000342220 SLC39A5Q6ZMH5 540 aa13.47□□□□□ -0.25
COL18A1-201ENST00000342220 SYDE1Q6ZW31 735 aaPredicted RBP13.47□□□□□ -0.25
COL18A1-201ENST00000342220 TMEM110Q86TL2 294 aa13.47□□□□□ -0.25
COL18A1-201ENST00000342220 ZMIZ2Q8NF64 920 aa13.47□□□□□ -0.25
COL18A1-201ENST00000342220 FAF2Q96CS3 445 aa13.47□□□□□ -0.25
COL18A1-201ENST00000342220 ZNF512Q96ME7 567 aaPredicted RBP13.47□□□□□ -0.25
COL18A1-201ENST00000342220 APOL2Q9BQE5 337 aa13.47□□□□□ -0.25
COL18A1-201ENST00000342220 SLC4A5Q9BY07 1137 aa13.47□□□□□ -0.25
COL18A1-201ENST00000342220 TKTL2Q9H0I9 626 aa13.47□□□□□ -0.25
COL18A1-201ENST00000342220 DMAP1Q9NPF5 467 aaPredicted RBP13.47□□□□□ -0.25
COL18A1-201ENST00000342220 RGS18Q9NS28 235 aa13.47□□□□□ -0.25
COL18A1-201ENST00000342220 PIGVQ9NUD9 493 aa13.47□□□□□ -0.25
COL18A1-201ENST00000342220 ADAM28Q9UKQ2 775 aa13.47□□□□□ -0.25
COL18A1-201ENST00000342220 CDH9Q9ULB4 789 aa13.47□□□□□ -0.25
COL18A1-201ENST00000342220 PRUNE2Q8WUY3 3088 aa13.47□□□□□ -0.25
COL18A1-201ENST00000342220 ZNF236Q9UL36 1845 aa13.47□□□□□ -0.25
COL18A1-201ENST00000342220 DFFAO00273 331 aa13.47□□□□□ -0.25
COL18A1-201ENST00000342220 SUN1O94901 812 aa13.47□□□□□ -0.25
COL18A1-201ENST00000342220 SKIP12755 728 aa13.47□□□□□ -0.25
COL18A1-201ENST00000342220 WARSP23381 471 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms